Packages found in the base revision.
| Name | Version | |
|---|---|---|
| velvet | 1.2.10 | More information |
| vcflib | 1.0.1 | More information |
| umi-tools | 1.0.0 | More information |
| tbsp | 1.0.0-1.ec8fff4 | More information |
| tabixpp | 1.1.0 | More information |
| smithwaterman | 0.0.0-2.2610e25 | More information |
| sjcount | 3.2-1.292d391 | More information |
| samblaster | 0.1.24 | More information |
| salmon | 0.13.1 | More information |
| sailfish | 0.10.1 | More information |
| r-xbioc | 0.1.16-1.6ff0670 | More information |
| r-velocyto | 0.6-1.d779034 | More information |
| r-psiplot | 2.3.0 | More information |
| r-pore | 0.24 | More information |
| r-diversitree | 0.9-13 | More information |
| r-cssam | 1.4-1.9ec58c9 | More information |
| r-circus | 0.1.5 | More information |
| r-bseqsc | 1.0-1.fef3f3e | More information |
| r-absfiltergsea | 1.5.1 | More information |
| python-velocyto | 0.17.17 | More information |
| python-scanpy | 1.4.6 | More information |
| python-pypairix | 0.3.7 | More information |
| python-pygenometracks | 3.3 | More information |
| python-pyfit-sne | 1.0.1 | More information |
| python-pyfaidx | 0.5.8 | More information |
| python-ont-fast5-api | 1.4.4 | More information |
| python-loompy | 2.0.17 | More information |
| python-intervaltree | 3.0.2 | More information |
| python-hicmatrix | 12 | More information |
| python-hicexplorer | 2.1.4 | More information |
| python-hic2cool | 0.4.2 | More information |
| python-gffutils | 0.9-1.4034c54 | More information |
| python-cooler | 0.8.7 | More information |
| python-bbknn | 1.3.6 | More information |
| python2-pyfaidx | 0.5.8 | More information |
| python2-checkm-genome | 1.0.13 | More information |
| pplacer | 1.1.alpha19 | More information |
| poretools | 0.6.0-1.e426b1f | More information |
| porechop | 0.2.3-1.289d5dc | More information |
| pigx-scrnaseq | 1.1.4 | More information |
| pigx-rnaseq | 0.0.10 | More information |
| pigx-chipseq | 0.0.42 | More information |
| pigx-bsseq | 0.0.10 | More information |
| pigx | 0.0.3 | More information |
| ngless | 1.1.0 | More information |
| nanopolish | 0.11.1-1.6331dc4 | More information |
| multichoose | 1.0.3 | More information |
| minimap2 | 2.17 | More information |
| miniasm | 0.3 | More information |
| methyldackel | 0.4.0 | More information |
| mantis | 0-1.4ffd171 | More information |
| libsbml | 5.18.0 | More information |
| libgff | 1.0 | More information |
| kallisto | 0.44.0 | More information |
| java-forester | 1.005 | More information |
| java-forester | 0-1.86b07ef | More information |
| java-biojava-phylo | 4.2.11 | More information |
| java-biojava-phylo | 4.0.0 | More information |
| java-biojava-core | 4.2.11 | More information |
| java-biojava-core | 4.0.0 | More information |
| java-biojava-alignment | 4.2.11 | More information |
| java-biojava-alignment | 4.0.0 | More information |
| jamm | 1.0.7.6 | More information |
| intervaltree | 0.0.0-1.b90527f | More information |
| grocsvs | 0.2.6.1-1.ecd956a | More information |
| gffread | 0.9.12-1.ba7535f | More information |
| gffcompare | 0.10.15-1.be56ef4 | More information |
| genrich | 0.5 | More information |
| fsom | 0.0.0-1.a6ef318 | More information |
| freebayes | 1.0.2-1.3ce827d | More information |
| find-circ | 1.2-1.8655dca | More information |
| filtlong | 0.2.0-1.d1bb46d | More information |
| fastahack | 1.0.0 | More information |
| dropseq-tools | 1.13 | More information |
| cnvkit | 0.9.5 | More information |
| bbmap | 35.82 | More information |
| ataqv | 1.0.0 | More information |
| arriba | 1.0.1 | More information |
| adapterremoval | 2.3.0 | More information |
Packages found in the target revision.
| Name | Version | |
|---|---|---|
| velvet | 1.2.10 | More information |
| vcflib | 1.0.1 | More information |
| umi-tools | 1.0.0 | More information |
| tbsp | 1.0.0-1.ec8fff4 | More information |
| tabixpp | 1.1.0 | More information |
| smithwaterman | 0.0.0-2.2610e25 | More information |
| sjcount | 3.2-1.292d391 | More information |
| samblaster | 0.1.24 | More information |
| salmon | 0.13.1 | More information |
| sailfish | 0.10.1 | More information |
| r-xbioc | 0.1.16-1.6ff0670 | More information |
| r-velocyto | 0.6-1.d779034 | More information |
| r-psiplot | 2.3.0 | More information |
| r-pore | 0.24 | More information |
| r-diversitree | 0.9-13 | More information |
| r-cssam | 1.4-1.9ec58c9 | More information |
| r-circus | 0.1.5 | More information |
| r-bseqsc | 1.0-1.fef3f3e | More information |
| r-absfiltergsea | 1.5.1 | More information |
| python-velocyto | 0.17.17 | More information |
| python-scanpy | 1.4.6 | More information |
| python-pypairix | 0.3.7 | More information |
| python-pygenometracks | 3.3 | More information |
| python-pyfit-sne | 1.0.1 | More information |
| python-pyfaidx | 0.5.8 | More information |
| python-ont-fast5-api | 1.4.4 | More information |
| python-loompy | 2.0.17 | More information |
| python-intervaltree | 3.0.2 | More information |
| python-hicmatrix | 12 | More information |
| python-hicexplorer | 2.1.4 | More information |
| python-hic2cool | 0.4.2 | More information |
| python-gffutils | 0.9-1.4034c54 | More information |
| python-cooler | 0.8.7 | More information |
| python-bbknn | 1.3.6 | More information |
| python2-pyfaidx | 0.5.8 | More information |
| python2-checkm-genome | 1.0.13 | More information |
| pplacer | 1.1.alpha19 | More information |
| poretools | 0.6.0-1.e426b1f | More information |
| porechop | 0.2.3-1.289d5dc | More information |
| pigx-scrnaseq | 1.1.4 | More information |
| pigx-rnaseq | 0.0.10 | More information |
| pigx-chipseq | 0.0.42 | More information |
| pigx-bsseq | 0.0.10 | More information |
| pigx | 0.0.3 | More information |
| ngless | 1.1.0 | More information |
| nanopolish | 0.11.1-1.6331dc4 | More information |
| multichoose | 1.0.3 | More information |
| minimap2 | 2.17 | More information |
| miniasm | 0.3 | More information |
| methyldackel | 0.4.0 | More information |
| mantis | 0-1.4ffd171 | More information |
| libsbml | 5.18.0 | More information |
| libgff | 1.0 | More information |
| kallisto | 0.44.0 | More information |
| java-forester | 1.005 | More information |
| java-forester | 0-1.86b07ef | More information |
| java-biojava-phylo | 4.2.11 | More information |
| java-biojava-phylo | 4.0.0 | More information |
| java-biojava-core | 4.2.11 | More information |
| java-biojava-core | 4.0.0 | More information |
| java-biojava-alignment | 4.2.11 | More information |
| java-biojava-alignment | 4.0.0 | More information |
| jamm | 1.0.7.6 | More information |
| intervaltree | 0.0.0-1.b90527f | More information |
| grocsvs | 0.2.6.1-1.ecd956a | More information |
| gffread | 0.9.12-1.ba7535f | More information |
| gffcompare | 0.10.15-1.be56ef4 | More information |
| genrich | 0.5 | More information |
| fsom | 0.0.0-1.a6ef318 | More information |
| freebayes | 1.0.2-1.3ce827d | More information |
| find-circ | 1.2-1.8655dca | More information |
| filtlong | 0.2.0-1.d1bb46d | More information |
| fastahack | 1.0.0 | More information |
| dropseq-tools | 1.13 | More information |
| cnvkit | 0.9.5 | More information |
| bbmap | 35.82 | More information |
| ataqv | 1.0.0 | More information |
| arriba | 1.0.1 | More information |
| adapterremoval | 2.3.0 | More information |