P-value computation for position weight matrices
In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, we are interested in the significance of certain match scores. TFMPvalue provides the accurate calculation of a p-value with a score threshold for position weight matrices, or the score with a given p-value. It is an interface to code originally made available by Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15. Touzet and Varre (2007).
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/3mwxagi5jlip9i9ylh3kyc6cd542910w-r-tfmpvalue-0.0.8.drv | ||
| mips64el-linux | /gnu/store/nrrkjf3rzh5hhrvxn0zdxzizmsxiy01y-r-tfmpvalue-0.0.8.drv | ||
| i686-linux | /gnu/store/jpc1fcbgsnwawn22d3y890dn29rnzjrv-r-tfmpvalue-0.0.8.drv | ||
| i586-gnu | /gnu/store/dqq85x1yd3lk7mahv4qhwv7r11f0q181-r-tfmpvalue-0.0.8.drv | ||
| armhf-linux | /gnu/store/v6g9hcrj2m5yv90jyh1l89920wibpg26-r-tfmpvalue-0.0.8.drv | ||
| aarch64-linux | /gnu/store/9vvvdi6xvnigzxky2fx2wlzr2vz4wna9-r-tfmpvalue-0.0.8.drv |
| Linter | Message | Location |
|---|---|---|
| No lint warnings ✓ | ||