Process, analyze and visualize Hi-C data
HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data. HiCExplorer facilitates the creation of contact matrices, correction of contacts, TAD detection, A/B compartments, merging, reordering or chromosomes, conversion from different formats including cooler and detection of long-range contacts. Moreover, it allows the visualization of multiple contact matrices along with other types of data like genes, compartments, ChIP-seq coverage tracks (and in general any type of genomic scores), long range contacts and the visualization of viewpoints.
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/a2basfx5qr11hxagmajg0vhv0wdsnq70-python-hicexplorer-2.1.4.drv | ||
| mips64el-linux | /gnu/store/69w5f10sfwg5frvawvw1d9v9b5p5jpkw-python-hicexplorer-2.1.4.drv | ||
| i686-linux | /gnu/store/gr6b7vm58i5lmgfl8lb2ccaf0ns56iff-python-hicexplorer-2.1.4.drv | ||
| armhf-linux | /gnu/store/vii0iz2d97h361jvb4sapl2ry1dg76mv-python-hicexplorer-2.1.4.drv | ||
| aarch64-linux | /gnu/store/9dp3zks51r8yg0j5fa216259xfzwr8n8-python-hicexplorer-2.1.4.drv |
| Linter | Message | Location |
|---|---|---|
| derivation Report failure to compile a package to a derivation | failed to create x86_64-linux derivation: path ‘/gnu/store/25lwbyviicmcllzgrn7d7by2mq0q7mvd-python-packaging-19.2.drv’ is not valid | |
| derivation Report failure to compile a package to a derivation | failed to create i686-linux derivation: path ‘/gnu/store/imq41gd3q2767il9gq6mqh5cv44x09rf-guile-2.2.6.drv’ is not valid | |
| derivation Report failure to compile a package to a derivation | failed to create armhf-linux derivation: path ‘/gnu/store/9wn798a6w534mnn4f28lglbjmib9n392-zlib-1.2.11.drv’ is not valid | |
| derivation Report failure to compile a package to a derivation | failed to create aarch64-linux derivation: path ‘/gnu/store/0afbxr7962z9ci6kw840n088qsmyz8lr-guile-2.2.6.drv’ is not valid | |
| derivation Report failure to compile a package to a derivation | failed to create mips64el-linux derivation: path ‘/gnu/store/aiwgcl5dppar2s8l408bshywjybsy3nd-zlib-1.2.11.drv’ is not valid |