Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/rh3i2x1isyv5zkf70kqkf6z9a4s8s2kj-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/7d40ihaglxxx8zda75bi8m4rh9fq2n59-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/wwx965ivmy651lirhmz2ks145s5hnvhq-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/apfm8nlx9gq5jhg3nd08zr9gai248dm4-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/vbm2ywiic4i2mavjx0gs2hsiclm37hgw-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/bn42d2w9dvnpm1zy8y7fq8j27nbkmkcb-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/ag4d4ypil14zl0grzzss140c0xnxyr4y-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/347599q69mkmmk9ckf8278vzn0nalzch-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/6mc7wwm1w1r35s463nncc5sav1y0gq3d-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 12225 is way too long (99 characters) |