Decomposition of bulk expression with single-cell sequencing
This package provides tools to accurately estimate cell type abundances from heterogeneous bulk expression. A reference-based method utilizes single-cell information to generate a signature matrix and transformation of bulk expression for accurate regression based estimates. A marker-based method utilizes known cell-specific marker genes to measure relative abundances across samples.
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/pinb3aqplh4s5lm1cpnmx1hnby4aqrpk-r-bisquerna-1.0.4.drv | ||
| mips64el-linux | /gnu/store/sb7h4v30dcbw3wy7krb7nw8jri838bp8-r-bisquerna-1.0.4.drv | ||
| i686-linux | /gnu/store/irirxwjlwp3vzxwqkz80j14v53v9qqm3-r-bisquerna-1.0.4.drv | ||
| i586-gnu | /gnu/store/463f14wgns3a94cab49jfjlwvigc2sz9-r-bisquerna-1.0.4.drv | ||
| armhf-linux | /gnu/store/xg4dxbc5v6fy1ljhnycvyibiyjhgan7h-r-bisquerna-1.0.4.drv | ||
| aarch64-linux | /gnu/store/6yah1ap8kkaainyqcr9zm0by1h8isqq0-r-bisquerna-1.0.4.drv |
| Linter | Message | Location |
|---|---|---|
| No lint warnings ✓ | ||