Variance stabilizing transformations for Single Cell UMI Data
This package provides a normalization method for single-cell UMI count data using a variance stabilizing transformation. The transformation is based on a negative binomial regression model with regularized parameters. As part of the same regression framework, this package also provides functions for batch correction, and data correction.
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/9y4hkyz8if5qrggcnbgl4snds5d2hic7-r-sctransform-0.2.1.drv | ||
| mips64el-linux | /gnu/store/ccq3169681bdbxw0mb9qg5x5f0wy8nsx-r-sctransform-0.2.1.drv | ||
| i686-linux | /gnu/store/aqh53g7lslcri11p2xfx5x2j9ian4qcg-r-sctransform-0.2.1.drv | ||
| i586-gnu | /gnu/store/hcjilvskzb020d6mdbjifqd09b2q54vi-r-sctransform-0.2.1.drv | ||
| armhf-linux | /gnu/store/gvh4n8b3lh34jv3x1963ffn2paiir81q-r-sctransform-0.2.1.drv | ||
| aarch64-linux | /gnu/store/d5qz248ws4vx8nih2arbjphfib3jf1i3-r-sctransform-0.2.1.drv |
| Linter | Message | Location |
|---|---|---|
| No lint warnings ✓ | ||