Process, analyze and visualize Hi-C data
HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data. HiCExplorer facilitates the creation of contact matrices, correction of contacts, TAD detection, A/B compartments, merging, reordering or chromosomes, conversion from different formats including cooler and detection of long-range contacts. Moreover, it allows the visualization of multiple contact matrices along with other types of data like genes, compartments, ChIP-seq coverage tracks (and in general any type of genomic scores), long range contacts and the visualization of viewpoints.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/d0kji8bay4pfb1n4sh74wq6yj8yf69ln-python-hicexplorer-2.1.4.drv | ||
mips64el-linux | /gnu/store/jf429ddljfszm19xj2nyxjs6wfkvp3mg-python-hicexplorer-2.1.4.drv | ||
i686-linux | /gnu/store/0p3c567lgg9494l920nncksj7xfxgvd2-python-hicexplorer-2.1.4.drv | ||
armhf-linux | /gnu/store/2plfsxiw97izwvlgr2mmzg8nv2bsb4hv-python-hicexplorer-2.1.4.drv | ||
aarch64-linux | /gnu/store/smw0jjj2ba2hbzazq9gcwc2vhhx8z67c-python-hicexplorer-2.1.4.drv |
Linter | Message | Location |
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No lint warnings ✓ |