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Package: python-hicexplorer @ 2.1.4

Synopsis

Process, analyze and visualize Hi-C data

Description

HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data. HiCExplorer facilitates the creation of contact matrices, correction of contacts, TAD detection, A/B compartments, merging, reordering or chromosomes, conversion from different formats including cooler and detection of long-range contacts. Moreover, it allows the visualization of multiple contact matrices along with other types of data like genes, compartments, ChIP-seq coverage tracks (and in general any type of genomic scores), long range contacts and the visualization of viewpoints.

Home page
http://hicexplorer.readthedocs.io
Location
gnu/packages/bioinformatics.scm (line: 13498, column: 2)
License

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