Mark duplicates in paired-end SAM files
Samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/bpsalp3qsvnk4y6l35qf5f9m0gr5rr77-samblaster-0.1.24.drv | ||
mips64el-linux | /gnu/store/rcywypravgrj1fz22sljr31km40iwv3r-samblaster-0.1.24.drv | ||
i686-linux | /gnu/store/2zzbvjiv45jjq9d4lpmzyx39z73aardz-samblaster-0.1.24.drv | ||
armhf-linux | /gnu/store/hjn14zc9b7hz6g2zcqnsgnvp0l9mslxs-samblaster-0.1.24.drv | ||
aarch64-linux | /gnu/store/7yza7rx5040jgrinwbxlz7bcnzg8s0aj-samblaster-0.1.24.drv |
Linter | Message | Location |
---|---|---|
description Validate package descriptions | sentences in description should be followed by two spaces; possible infraction at 263 |