Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/ws3ppxfy9rvm6iwvwxg30nwcz0q1x8np-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/dk7il8qa16846ra71l155prq8gvkimgq-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/jsx7hggg3m3f7z6hglkbi9n2vlc0dsww-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/izxw4y6vjkwsi4idbv61nx8dz2h2hzx2-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/407cl9si041f0y1va3g5qvydxyfy87gn-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/px533pqadi56wh6xgvbhdap164w8ffgv-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/rsfqfbsrmq9zxf34rz935imvmsr7rwp5-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/fsbqp0dc2i0z2j7yy1k4xicwahy0fzfn-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/i39bidnixbkx2dyybx0dvg1vzmvgvm48-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 12264 is way too long (99 characters) |