Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/vildxhkn4yxrvhmykpsp5zvmbd0xzs5q-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/f5kgx4x9vprxj2kfkxsg0ki2syijdrcw-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/yp5dcs0wyf5a5hicjbmqnvv5mgnr6nc2-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/kjpbrc229q8disgw0kp77776p8xi1iia-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/zqv2jll6n5rz046nqdd46xh9idpjhw5c-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/jilvq7c00wdjlb2ccqjdkvi1pcq16nr5-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/yligpvfsnihpmka7v701xpk8q0m8mg6j-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/gsyqsbwqx7dnfamdlxn8xp52j0rrgv1y-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/7cn2l8jya6jv82qg0qv7qxk3pb0lc2jn-salmon-0.13.1.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 12232 is way too long (99 characters) |