Mark duplicates in paired-end SAM files
Samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/rfj8pjzmj6zlsl0ss09mj5vcgpwmk55x-samblaster-0.1.24.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/8byz3gpacpb097dvmfb6r1nmrwxx5pzz-samblaster-0.1.24.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/0abglzibqv3rcy64jg8bvfi7pm2rnkd1-samblaster-0.1.24.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/3ai8yw7b5ahcxnjjigdyr51j5f51f6h9-samblaster-0.1.24.drv | |
mips64el-linux | /gnu/store/6bg0hx99yfby23dm5amivgv61mycc38n-samblaster-0.1.24.drv | ||
i686-linux | /gnu/store/qngx92sha2n7sh808mbbh71xv9d2y21c-samblaster-0.1.24.drv | ||
i586-gnu | /gnu/store/xzhd62pi084rc6z0i8lj2yiyx8j2zabj-samblaster-0.1.24.drv | ||
armhf-linux | /gnu/store/kb5psxwbfnff62z4wq7n6hnl1gbh13ng-samblaster-0.1.24.drv | ||
aarch64-linux | /gnu/store/gj6rbdmcgdhjfskpz7kqa0a8chp6rb35-samblaster-0.1.24.drv |
Linter | Message | Location |
---|---|---|
description Validate package descriptions | sentences in description should be followed by two spaces; possible infraction at 263 |