Packages found in the base revision.
| Name | Version | |
|---|---|---|
| wiggletools | 1.2.11 | More information |
| wfmash | 0.21.0 | More information |
| wfa2-lib | 2.3.3 | More information |
| vsearch | 2.9.1 | More information |
| vembrane | 0.13.2 | More information |
| velvet | 1.2.10 | More information |
| vcftools | 0.1.16 | More information |
| vcflib | 1.0.9 | More information |
| vbz-compression | 1.0.3 | More information |
| variant-tools | 3.1.2 | More information |
| umi-tools | 1.0.0 | More information |
| trust4 | 1.1.0 | More information |
| trinityrnaseq | 2.13.2 | More information |
| trim-galore | 0.6.6 | More information |
| trf | 4.09.1 | More information |
| transanno | 0.3.0 | More information |
| tophat | 2.1.1 | More information |
| tombo | 1.5.1 | More information |
| tetoolkit | 2.2.1b | More information |
| tbsp | 1.0.0-2.dc30c03 | More information |
| taxtastic | 0.9.2 | More information |
| tadbit | 1.0.1-2.2838129 | More information |
| tabixpp | 1.1.2 | More information |
| sylamer | 18-131 | More information |
| subread | 2.0.3 | More information |
| stringtie | 2.2.0 | More information |
| stpipeline | 1.8.1 | More information |
| starlong | 2.7.8a | More information |
| star | 2.7.8a | More information |
| star | 2.7.3a | More information |
| sra-tools | 2.10.6 | More information |
| sortmerna | 4.3.4 | More information |
| snap-aligner | 2.0.0 | More information |
| smithwaterman | 0.0.0-2.2610e25 | More information |
| smithlab-cpp | 0.1.728a097 | More information |
| sjcount | 3.2-1.292d391 | More information |
| shorah | 1.99.2 | More information |
| seqtk | 1.3 | More information |
| seqmagick | 0.8.4 | More information |
| seqan | 3.0.3 | More information |
| seqan | 2.4.0 | More information |
| seqan | 1.4.2 | More information |
| segemehl | 0.3.4 | More information |
| seek | 1-1.196ed4c | More information |
| scvelo | 0.2.4 | More information |
| scregseg | 0.1.3 | More information |
| scallop | 0.10.5 | More information |
| savvy | 2.1.0 | More information |
| samtools | 1.2 | More information |
| samtools | 1.19 | More information |
| samtools | 1.14 | More information |
| samtools | 1.12 | More information |
| samtools | 1.10 | More information |
| samtools | 0.1.19 | More information |
| samblaster | 0.1.26 | More information |
| sambamba | 0.8.2 | More information |
| salmon | 1.10.1 | More information |
| sailfish | 0.10.1 | More information |
| r-xbioc | 0.1.16-1.6ff0670 | More information |
| r-voltron | 1.0.0-1.5057b70 | More information |
| r-velocyto | 0.6-1.d779034 | More information |
| r-umi4cpackage | 0.0.1-1.88b07d8 | More information |
| ruby-bio-kseq | 0.0.2 | More information |
| r-tsis | 0.2.0-1.2446029 | More information |
| r-spectre | 0.5.5-1.f6648ab | More information |
| r-spacexr | 2.2.1-1.0a0861e | More information |
| r-snapatac | 2.0 | More information |
| r-sleuth | 0.30.1 | More information |
| r-skitools | 0.0.0.9000-1.22d107d | More information |
| r-signac | 1.12.0-1.8ecdde2 | More information |
| r-shinycell | 2.0.0-1.aecbd56 | More information |
| r-shaman | 2.0-2.d6944e8 | More information |
| r-seuratwrappers | 0.3.1-1.d28512f | More information |
| r-seurat-utils | 2.5.0-1.c0374cc | More information |
| r-seuratextenddata | 0.2.1-1.e7f17d4 | More information |
| r-seuratextend | 1.0.7-1.5382e92 | More information |
| r-seraster | 0.99.0-1.4fdc1ff | More information |
| r-seqgl | 1.1.4 | More information |
| rseqc | 3.0.1 | More information |
| rsem | 1.3.3 | More information |
| r-scseqcomm | 0-0.01076e7 | More information |
| r-scopeloomr | 0.13.0-1.99726f5 | More information |
| r-scde | 1.99.2 | More information |
| r-sccustomize | 2.0.1-1.3973745 | More information |
| rscape | 2.0.0.q | More information |
| r-rphyloxml | 0.0-9000-1.a30e392 | More information |
| r-rnaseqdtu | 2.0-1.5bee1e7 | More information |
| r-rnacrosslinkoo | 0.1.3-1.a317e0f | More information |
| r-raremetals2 | 0.1 | More information |
| r-r4rna | 0.1.4 | More information |
| r-psupertime | 0.2.6-1.73825a2 | More information |
| r-psiplot | 2.3.0 | More information |
| r-projectils | 3.0.0-1.cc73b97 | More information |
| r-presto | 1.0.0-0.052085d | More information |
| r-premessa | 0.3.4-1.68b42bb | More information |
| r-pore | 0.24 | More information |
| r-plsdabatch | 0.2.3-1.4aadf3a | More information |
| r-phantompeakqualtools | 1.2.2-1.8d2b2d1 | More information |
| r-pando | 1.0.5 | More information |
| r-pairwiseadonis | 0.4.1-1.cb190f7 | More information |
| r-pairadise | 1.0.0 | More information |
| r-omnipathr | 3.5.5-1.679bb79 | More information |
| roary | 3.12.0 | More information |
| r-misha | 4.1.0 | More information |
| r-millefy | 0.1.9-beta | More information |
| r-miamiplot | 1.1.0-1.beede9c | More information |
| r-metadeconfoundr | 0.3.0-1.90aec02 | More information |
| r-metacell | 0.3.41-1.d6a6926 | More information |
| r-maxprobes | 0.0.2-1.c2120db | More information |
| r-markdownreports | 4.5.9-1.3ba1103 | More information |
| r-markdownhelpers | 0.2.0-1.793372d | More information |
| r-liana | 0.1.11-1.10d8177 | More information |
| r-kbet | 0.99.6-1.f35171d | More information |
| ritornello | 2.0.1 | More information |
| r-illuminahumanmethylationepicmanifest | 1.0.0-1.a9ffbad | More information |
| r-illuminahumanmethylationepicanno-ilm10b5-hg38 | 0.0.1-1.3db0691 | More information |
| r-icellnet | 2.2.1-1.e10ee4a | More information |
| r-gutils | 0.2.0-1.10e36c7 | More information |
| r-gtrack | 0.1.0-1.a694fa3 | More information |
| r-giotto | 1.1.2-1.3c8067c | More information |
| r-ggsankey | 0.0.99999-1.be08dd0 | More information |
| r-ggexpress | 0.6.6-1.82f1693 | More information |
| r-gg3d | 0.0.0.9000-1.ffdd837 | More information |
| r-gchain | 0.2.0-1.dc393e8 | More information |
| repeat-masker | 4.1.2-p1 | More information |
| r-dtmm | 0.1.0-1.3a553b1 | More information |
| r-dropbead | 0-2.d746c6f | More information |
| r-doubletfinder | 2.0.3-1.554097b | More information |
| r-doubletcollection | 1.1.0-1.c0d62f1 | More information |
| r-domultibarheatmap | 0.1.0-1.9e65afa | More information |
| r-dnamcrosshyb | 0.0.0.9000-1.fe8acb3 | More information |
| r-disgenet2r | 0.99.2-1.8d8ce37 | More information |
| r-demuxmix | 1.1.1-1.09a7918 | More information |
| r-demultiplex2 | 1.0.2-2.c1ce09e | More information |
| r-demultiplex | 1.0.2-1.6e2a142 | More information |
| r-databaselinke-r | 1.7.0-1.cf3d6cc | More information |
| r-cytonorm | 0.0.10-1.166f9ff | More information |
| r-cytoexplorer | 1.1.0-1.0efb1cc | More information |
| r-cytobackbone | 1.0.0-1.4c1a0a3 | More information |
| r-cssam | 1.4-1.9ec58c9 | More information |
| r-copykat | 1.0.8-0.256de33 | More information |
| r-compgenomrdata | 0.1.0-1.24484cb | More information |
| r-cmdstanr | 0.8.1.9000-1.a45d4f7 | More information |
| r-circus | 0.1.7 | More information |
| r-chromvarmotifs | 0.2.0-1.38bed55 | More information |
| r-chromunity | 0.0.2-1.712e56c | More information |
| r-chipkernels | 1.1-1.c9cfcac | More information |
| r-centipede | 1.2 | More information |
| r-cellchat | 2.1.2-1.b05405a | More information |
| r-cellchat | 1.0.0-1.21edd22 | More information |
| r-catch | 1.0-1.196ddd5 | More information |
| rcas-web | 0.1.0-2.71c93e3 | More information |
| r-bseqsc | 1.0-1.fef3f3e | More information |
| r-battenberg | 2.2.9 | More information |
| r-bamutils | 0.0.0.9000-1.639dba9 | More information |
| r-azimuth | 0.5.0-1.243ee5d | More information |
| raxml | 8.2.12 | More information |
| r-ascat | 2.5.2 | More information |
| r-archr | 1.0.2-1.c61b064 | More information |
| qtltools | 1.3.1 | More information |
| python-vireosnp | 0.5.7 | More information |
| python-velocyto | 0.17.17 | More information |
| python-twobitreader | 3.1.6 | More information |
| python-taggd | 0.3.6 | More information |
| python-strawc | 0.0.2.1 | More information |
| python-slamdunk | 0.4.3 | More information |
| python-scrublet | 0.2.3 | More information |
| python-screed | 1.1.2 | More information |
| python-scikit-bio | 0.6.0 | More information |
| python-schema-salad | 8.5.20240102191335 | More information |
| python-scanpy | 1.9.6 | More information |
| python-scanorama | 1.7.2 | More information |
| python-pyvcf | 0.6.8-0.476169c | More information |
| python-pyspoa | 0.0.5 | More information |
| python-pysam | 0.20.0 | More information |
| python-pyrodigal | 3.3.0 | More information |
| python-pypairix | 0.3.7 | More information |
| python-pyliftover | 0.4 | More information |
| python-pygenometracks | 3.5 | More information |
| python-pyfit-sne | 1.2.1 | More information |
| python-pyfasta | 0.5.2-1.c2f0611 | More information |
| python-pyfaidx | 0.7.2.1 | More information |
| python-pybigwig | 0.3.22 | More information |
| python-pybbi | 0.3.0 | More information |
| python-pyani | 0.2.12 | More information |
| python-pyahocorasick | 2.1.0 | More information |
| python-py2bit | 0.3.0 | More information |
| python-plastid | 0.6.1 | More information |
| python-ont-fast5-api | 4.0.0 | More information |
| python-mygene | 3.2.2 | More information |
| python-muon | 0.1.6 | More information |
| python-multivelo | 0.1.2 | More information |
| python-mudata | 0.2.3 | More information |
| python-mofax | 0.4.0-0.4d96f8f | More information |
| python-mofapy2 | 0.7.1 | More information |
| python-mgatk | 0.6.7 | More information |
| python-mappy | 2.24 | More information |
| python-loompy | 3.0.7 | More information |
| python-intervaltree | 3.1.0 | More information |
| python-illumina-utils | 2.12 | More information |
| python-ikarus | 0.0.2 | More information |
| python-iced | 0.5.8 | More information |
| python-hicmatrix | 17.1 | More information |
| python-hicexplorer | 3.7.4 | More information |
| python-hic2cool | 0.8.3 | More information |
| python-gseapy | 1.0.4 | More information |
| python-goatools | 1.3.1 | More information |
| python-gffutils | 0.10.1 | More information |
| python-genomic-regions | 0.0.10 | More information |
| python-genomepy | 0.15.0 | More information |
| python-fcsparser | 0.2.8 | More information |
| python-fastalite | 0.3 | More information |
| python-fanc | 0.9.25 | More information |
| python-ete3 | 3.1.3 | More information |
| python-episcanpy | 0.4.0 | More information |
| python-drep | 3.2.0 | More information |
| python-dnaio | 0.10.0 | More information |
| python-dna-features-viewer | 3.1.1 | More information |
| python-dendropy | 4.5.1 | More information |
| python-deeptoolsintervals | 0.1.9 | More information |
| python-deeptools | 3.5.5 | More information |
| python-cwl-utils | 0.32 | More information |
| python-cwl-upgrader | 1.2.11 | More information |
| python-cwlformat | 2022.02.18 | More information |
| python-ctxcore | 0.2.0 | More information |
| python-cooltools | 0.7.0 | More information |
| python-cooler | 0.9.3 | More information |
| python-coolbox | 0.3.8 | More information |
| python-cgatcore | 0.6.15 | More information |
| python-bx-python | 0.9.0 | More information |
| python-bwapy | 0.1.4 | More information |
| python-biothings-client | 0.2.6 | More information |
| python-biopython | 1.80 | More information |
| python-biopython | 1.73 | More information |
| python-bbknn | 1.6.0 | More information |
| python-bamnostic | 1.1.8 | More information |
| python-baltica | 1.1.2 | More information |
| python-arboreto | 0.1.6 | More information |
| pyscenic | 0.11.2-1.5f170fd | More information |
| proteinortho | 6.3.2 | More information |
| prodigal | 2.6.3 | More information |
| prinseq | 0.20.4 | More information |
| preseq | 2.0.3 | More information |
| prank | 170427 | More information |
| porechop | 0.2.3-1.289d5dc | More information |
| plink-ng | 2.00a3.3 | More information |
| plink | 1.07 | More information |
| piranha | 1.2.1-1.0466d36 | More information |
| pigx-scrnaseq | 1.1.9 | More information |
| pigx-sars-cov-2 | 0.0.9 | More information |
| pigx-rnaseq | 0.1.1 | More information |
| pigx-chipseq | 0.1.0 | More information |
| pigx-bsseq | 0.1.8 | More information |
| pigx | 0.0.3 | More information |
| phyml | 3.3.20220408 | More information |
| phylip | 3.697 | More information |
| phast | 1.5 | More information |
| perl-cworld-dekker | 1.01 | More information |
| perl-bio-db-hts | 3.01 | More information |
| pardre | 2.2.5 | More information |
| paml | 4.9e | More information |
| pairadise | 1.0.0 | More information |
| orfm | 0.7.1 | More information |
| ngs-sdk | 2.10.5 | More information |
| ngshmmalign | 0.1.1 | More information |
| ngless | 1.5.0 | More information |
| newick-utils | 1.6-1.da121155 | More information |
| ncbi-vdb | 2.10.6 | More information |
| nanosv | 1.2.4 | More information |
| nanopolish | 0.14.0 | More information |
| music | 0.0.0-1.b1caecd | More information |
| muscle | 3.8.1551 | More information |
| multiqc | 1.14 | More information |
| multichoose | 1.0.3 | More information |
| mudskipper | 0.1.0 | More information |
| mosaik | 2.2.30 | More information |
| mosaicatcher | 0.3.1 | More information |
| morpheus | 2.3.6 | More information |
| minimap2 | 2.28 | More information |
| miniasm | 0.3 | More information |
| minced | 0.3.2 | More information |
| methyldackel | 0.6.1 | More information |
| metal | 2011-03-25 | More information |
| metabat | 2.15 | More information |
| megahit | 1.2.9 | More information |
| megadepth | 1.1.1 | More information |
| mash | 2.1 | More information |
| mantis | 0.1-2.b6979a2 | More information |
| mafft | 7.475 | More information |
| maffilter | 1.3.1 | More information |
| macs | 2.2.9.1 | More information |
| lsgkm | 0.1.1 | More information |
| louvain | 0.2 | More information |
| lofreq | 2.1.5 | More information |
| libsbml | 5.18.0 | More information |
| libmaus2 | 2.0.786 | More information |
| libgff | 2.0.0 | More information |
| libbigwig | 0.4.4 | More information |
| lammps-serial | 0.stable_2Aug2023_update2 | More information |
| lammps | 0.stable_2Aug2023_update2 | More information |
| kraken2 | 2.1.2 | More information |
| khmer | 3.0.0a3 | More information |
| kentutils | 302.0.0 | More information |
| kallisto | 0.50.1 | More information |
| kaiju | 1.9.0 | More information |
| jellyfish | 2.3.0 | More information |
| java-picard | 2.3.0 | More information |
| java-picard | 2.10.3 | More information |
| java-picard | 1.113 | More information |
| java-ngs | 2.10.5 | More information |
| java-maxent | 3.4.4 | More information |
| java-htsjdk | 2.3.0 | More information |
| java-htsjdk | 2.14.3 | More information |
| java-htsjdk | 2.10.1 | More information |
| java-forester | 1.005 | More information |
| java-forester | 0-1.86b07ef | More information |
| java-biojava-phylo | 4.2.11 | More information |
| java-biojava-phylo | 4.0.0 | More information |
| java-biojava-core | 4.2.11 | More information |
| java-biojava-core | 4.0.0 | More information |
| java-biojava-alignment | 4.2.11 | More information |
| java-biojava-alignment | 4.0.0 | More information |
| jamm | 1.0.7.6 | More information |
| ivar | 1.4.2 | More information |
| isolator | 0.0.2-1.24bafc0 | More information |
| intervaltree | 0.0.0-1.b90527f | More information |
| instrain | 1.5.4 | More information |
| infernal | 1.1.4 | More information |
| indelfixer | 1.1 | More information |
| imp | 2.15.0 | More information |
| idr | 2.0.3 | More information |
| htslib | 1.9 | More information |
| htslib | 1.19 | More information |
| htslib | 1.14 | More information |
| htslib | 1.12 | More information |
| htslib | 1.10 | More information |
| htseq | 2.0.2 | More information |
| htscodecs | 1.6.0 | More information |
| homer | 4.11.1 | More information |
| hmmer | 3.3.2 | More information |
| hisat2 | 2.2.1 | More information |
| hisat | 0.1.6 | More information |
| hh-suite | 3.3.0 | More information |
| go-github-com-biogo-store-step | 0.0.0-20201120204734-aad293a2328f | More information |
| go-github-com-biogo-store-llrb | 0.0.0-20201120204734-aad293a2328f | More information |
| go-github-com-biogo-store-kdtree | 0.0.0-20201120204734-aad293a2328f | More information |
| go-github-com-biogo-store-interval | 0.0.0-20201120204734-aad293a2328f | More information |
| go-github-com-biogo-hts-tabix | 1.4.4 | More information |
| go-github-com-biogo-hts-sam | 1.4.4 | More information |
| go-github-com-biogo-hts-fai | 1.4.4 | More information |
| go-github-com-biogo-hts-csi | 1.4.4 | More information |
| go-github-com-biogo-hts-cram | 1.4.4 | More information |
| go-github-com-biogo-hts-bgzf | 1.4.4 | More information |
| go-github-com-biogo-hts-bam | 1.4.4 | More information |
| go-github-com-biogo-graph | 0.0.0-20150317020928-057c1989faed | More information |
| go-github-com-biogo-biogo | 1.0.4 | More information |
| ghc-int-interval-map | 0.0.0.0 | More information |
| gffread | 0.9.12-1.ba7535f | More information |
| gffcompare | 0.10.15-1.be56ef4 | More information |
| genrich | 0.5 | More information |
| gemma | 0.98.3 | More information |
| gdcm | 3.0.20 | More information |
| gdc-client | 1.6.0 | More information |
| fxtract | 2.3 | More information |
| fsom | 0.0.0-1.a6ef318 | More information |
| f-seq | 1.1-1.6ccded3 | More information |
| freebayes | 1.3.7 | More information |
| flexbar | 3.4.0 | More information |
| flash | 1.2.11 | More information |
| flair | 1.6.4 | More information |
| fit-sne | 1.2.1 | More information |
| filtlong | 0.2.0-1.d1bb46d | More information |
| filevercmp | 0-1.1a9b779 | More information |
| fastx-toolkit | 0.0.14 | More information |
| fasttree | 2.1.10 | More information |
| fastqc | 0.11.9 | More information |
| fastp | 0.23.2 | More information |
| fastahack | 1.0.0 | More information |
| fanc | 0-1.354401e | More information |
| express-beta-diversity | 1.0.8 | More information |
| express | 1.5.3 | More information |
| exonerate | 2.4.0 | More information |
| ensembl-vep | 112 | More information |
| emboss | 6.5.7 | More information |
| eigensoft | 7.2.1 | More information |
| edirect-go-programs | 13.3.20200128 | More information |
| edirect | 13.3.20200128 | More information |
| eddylab-squid | 1.9g | More information |
| dropseq-tools | 1.13 | More information |
| discrover | 1.6.0 | More information |
| diamond | 2.1.6 | More information |
| delly | 0.8.3 | More information |
| cwltool | 3.1.20240112164112 | More information |
| cutadapt | 4.0 | More information |
| crossmap | 0.6.1 | More information |
| codingquarry | 2.0 | More information |
| cnvkit | 0.9.10 | More information |
| clustal-omega | 1.2.4 | More information |
| clipper | 2.0.1 | More information |
| ciri-long | 1.0.2 | More information |
| circtools | 1.0.0 | More information |
| checkm | 1.1.3 | More information |
| centrifuge | 1.0.4 | More information |
| cd-hit-auxtools | 4.8.1 | More information |
| cd-hit | 4.8.1 | More information |
| ccwl | 0.3.0 | More information |
| bwa-pssm | 0.5.11 | More information |
| bwa-meth | 0.2.3 | More information |
| bwa | 0.7.18 | More information |
| bppsuite | 2.4.1 | More information |
| bpp-seq-omics | 2.4.1 | More information |
| bpp-seq | 2.4.1 | More information |
| bpp-popgen | 2.4.1 | More information |
| bpp-phyl-omics | 2.4.1 | More information |
| bpp-phyl | 2.4.1 | More information |
| bpp-core | 2.4.1 | More information |
| bowtie1 | 1.3.1 | More information |
| bowtie | 2.3.4.3 | More information |
| bless | 1p02 | More information |
| blast+ | 2.14.0 | More information |
| bits | 2.13.0-1.3cc4567 | More information |
| bismark | 0.24.1 | More information |
| bio-vcf | 0.9.5 | More information |
| biosoup | 0.10.0 | More information |
| bioruby | 2.0.4 | More information |
| bioperl-minimal | 1.7.0 | More information |
| bioparser | 3.0.13 | More information |
| bio-locus | 0.0.7 | More information |
| bio-blastxmlparser | 2.0.4 | More information |
| biobambam2 | 2.0.182 | More information |
| bbmap | 39.01 | More information |
| bandage | 0.8.1 | More information |
| ataqv | 1.0.0 | More information |
| arriba | 1.0.1 | More information |
| adapterremoval | 2.3.3 | More information |
Packages found in the target revision.
| Name | Version | |
|---|---|---|
| wiggletools | 1.2.11 | More information |
| wfmash | 0.21.0 | More information |
| wfa2-lib | 2.3.3 | More information |
| vsearch | 2.9.1 | More information |
| vembrane | 0.13.2 | More information |
| velvet | 1.2.10 | More information |
| vcftools | 0.1.16 | More information |
| vcflib | 1.0.9 | More information |
| vbz-compression | 1.0.3 | More information |
| variant-tools | 3.1.2 | More information |
| umi-tools | 1.0.0 | More information |
| trust4 | 1.1.0 | More information |
| trinityrnaseq | 2.13.2 | More information |
| trim-galore | 0.6.6 | More information |
| trf | 4.09.1 | More information |
| transanno | 0.3.0 | More information |
| tophat | 2.1.1 | More information |
| tombo | 1.5.1 | More information |
| tetoolkit | 2.2.1b | More information |
| tbsp | 1.0.0-2.dc30c03 | More information |
| taxtastic | 0.9.2 | More information |
| tadbit | 1.0.1-2.2838129 | More information |
| tabixpp | 1.1.2 | More information |
| sylamer | 18-131 | More information |
| subread | 2.0.3 | More information |
| stringtie | 2.2.0 | More information |
| stpipeline | 1.8.1 | More information |
| starlong | 2.7.8a | More information |
| star | 2.7.8a | More information |
| star | 2.7.3a | More information |
| sra-tools | 2.10.6 | More information |
| sortmerna | 4.3.4 | More information |
| snap-aligner | 2.0.0 | More information |
| smithwaterman | 0.0.0-2.2610e25 | More information |
| smithlab-cpp | 0.1.728a097 | More information |
| sjcount | 3.2-1.292d391 | More information |
| shorah | 1.99.2 | More information |
| seqtk | 1.3 | More information |
| seqmagick | 0.8.4 | More information |
| seqan | 3.0.3 | More information |
| seqan | 2.4.0 | More information |
| seqan | 1.4.2 | More information |
| segemehl | 0.3.4 | More information |
| seek | 1-1.196ed4c | More information |
| scvelo | 0.2.4 | More information |
| scregseg | 0.1.3 | More information |
| scallop | 0.10.5 | More information |
| savvy | 2.1.0 | More information |
| samtools | 1.2 | More information |
| samtools | 1.19 | More information |
| samtools | 1.14 | More information |
| samtools | 1.12 | More information |
| samtools | 1.10 | More information |
| samtools | 0.1.19 | More information |
| samblaster | 0.1.26 | More information |
| sambamba | 0.8.2 | More information |
| salmon | 1.10.1 | More information |
| sailfish | 0.10.1 | More information |
| r-xbioc | 0.1.16-1.6ff0670 | More information |
| r-voltron | 1.0.0-1.5057b70 | More information |
| r-velocyto | 0.6-1.d779034 | More information |
| r-umi4cpackage | 0.0.1-1.88b07d8 | More information |
| ruby-bio-kseq | 0.0.2 | More information |
| r-tsis | 0.2.0-1.2446029 | More information |
| r-spectre | 0.5.5-1.f6648ab | More information |
| r-spacexr | 2.2.1-1.0a0861e | More information |
| r-snapatac | 2.0 | More information |
| r-sleuth | 0.30.1 | More information |
| r-skitools | 0.0.0.9000-1.22d107d | More information |
| r-signac | 1.12.0-1.8ecdde2 | More information |
| r-shinycell | 2.0.0-1.aecbd56 | More information |
| r-shaman | 2.0-2.d6944e8 | More information |
| r-seuratwrappers | 0.3.1-1.d28512f | More information |
| r-seurat-utils | 2.5.0-1.c0374cc | More information |
| r-seuratextenddata | 0.2.1-1.e7f17d4 | More information |
| r-seuratextend | 1.0.7-1.5382e92 | More information |
| r-seraster | 0.99.0-1.4fdc1ff | More information |
| r-seqgl | 1.1.4 | More information |
| rseqc | 3.0.1 | More information |
| rsem | 1.3.3 | More information |
| r-scseqcomm | 0-0.01076e7 | More information |
| r-scopeloomr | 0.13.0-1.99726f5 | More information |
| r-scde | 1.99.2 | More information |
| r-sccustomize | 2.0.1-1.3973745 | More information |
| rscape | 2.0.0.q | More information |
| r-rphyloxml | 0.0-9000-1.a30e392 | More information |
| r-rnaseqdtu | 2.0-1.5bee1e7 | More information |
| r-rnacrosslinkoo | 0.1.3-1.a317e0f | More information |
| r-raremetals2 | 0.1 | More information |
| r-r4rna | 0.1.4 | More information |
| r-psupertime | 0.2.6-1.73825a2 | More information |
| r-psiplot | 2.3.0 | More information |
| r-projectils | 3.0.0-1.cc73b97 | More information |
| r-presto | 1.0.0-0.052085d | More information |
| r-premessa | 0.3.4-1.68b42bb | More information |
| r-pore | 0.24 | More information |
| r-plsdabatch | 0.2.3-1.4aadf3a | More information |
| r-phantompeakqualtools | 1.2.2-1.8d2b2d1 | More information |
| r-pando | 1.0.5 | More information |
| r-pairwiseadonis | 0.4.1-1.cb190f7 | More information |
| r-pairadise | 1.0.0 | More information |
| r-omnipathr | 3.5.5-1.679bb79 | More information |
| roary | 3.12.0 | More information |
| r-misha | 4.1.0 | More information |
| r-millefy | 0.1.9-beta | More information |
| r-miamiplot | 1.1.0-1.beede9c | More information |
| r-metadeconfoundr | 0.3.0-1.90aec02 | More information |
| r-metacell | 0.3.41-1.d6a6926 | More information |
| r-maxprobes | 0.0.2-1.c2120db | More information |
| r-markdownreports | 4.5.9-1.3ba1103 | More information |
| r-markdownhelpers | 0.2.0-1.793372d | More information |
| r-liana | 0.1.11-1.10d8177 | More information |
| r-kbet | 0.99.6-1.f35171d | More information |
| ritornello | 2.0.1 | More information |
| r-illuminahumanmethylationepicmanifest | 1.0.0-1.a9ffbad | More information |
| r-illuminahumanmethylationepicanno-ilm10b5-hg38 | 0.0.1-1.3db0691 | More information |
| r-icellnet | 2.2.1-1.e10ee4a | More information |
| r-gutils | 0.2.0-1.10e36c7 | More information |
| r-gtrack | 0.1.0-1.a694fa3 | More information |
| r-giotto | 1.1.2-1.3c8067c | More information |
| r-ggsankey | 0.0.99999-1.be08dd0 | More information |
| r-ggexpress | 0.6.6-1.82f1693 | More information |
| r-gg3d | 0.0.0.9000-1.ffdd837 | More information |
| r-gchain | 0.2.0-1.dc393e8 | More information |
| repeat-masker | 4.1.2-p1 | More information |
| r-dtmm | 0.1.0-1.3a553b1 | More information |
| r-dropbead | 0-2.d746c6f | More information |
| r-doubletfinder | 2.0.3-1.554097b | More information |
| r-doubletcollection | 1.1.0-1.c0d62f1 | More information |
| r-domultibarheatmap | 0.1.0-1.9e65afa | More information |
| r-dnamcrosshyb | 0.0.0.9000-1.fe8acb3 | More information |
| r-disgenet2r | 0.99.2-1.8d8ce37 | More information |
| r-demuxmix | 1.1.1-1.09a7918 | More information |
| r-demultiplex2 | 1.0.2-2.c1ce09e | More information |
| r-demultiplex | 1.0.2-1.6e2a142 | More information |
| r-databaselinke-r | 1.7.0-1.cf3d6cc | More information |
| r-cytonorm | 0.0.10-1.166f9ff | More information |
| r-cytoexplorer | 1.1.0-1.0efb1cc | More information |
| r-cytobackbone | 1.0.0-1.4c1a0a3 | More information |
| r-cssam | 1.4-1.9ec58c9 | More information |
| r-copykat | 1.0.8-0.256de33 | More information |
| r-compgenomrdata | 0.1.0-1.24484cb | More information |
| r-cmdstanr | 0.8.1.9000-1.a45d4f7 | More information |
| r-circus | 0.1.7 | More information |
| r-chromvarmotifs | 0.2.0-1.38bed55 | More information |
| r-chromunity | 0.0.2-1.712e56c | More information |
| r-chipkernels | 1.1-1.c9cfcac | More information |
| r-centipede | 1.2 | More information |
| r-cellchat | 2.1.2-1.b05405a | More information |
| r-cellchat | 1.0.0-1.21edd22 | More information |
| r-catch | 1.0-1.196ddd5 | More information |
| rcas-web | 0.1.0-2.71c93e3 | More information |
| r-bseqsc | 1.0-1.fef3f3e | More information |
| r-battenberg | 2.2.9 | More information |
| r-bamutils | 0.0.0.9000-1.639dba9 | More information |
| r-azimuth | 0.5.0-1.243ee5d | More information |
| raxml | 8.2.12 | More information |
| r-ascat | 2.5.2 | More information |
| r-archr | 1.0.2-1.c61b064 | More information |
| qtltools | 1.3.1 | More information |
| python-whatshap | 2.3-0.5722d69 | More information |
| python-vireosnp | 0.5.7 | More information |
| python-velocyto | 0.17.17 | More information |
| python-twobitreader | 3.1.6 | More information |
| python-taggd | 0.3.6 | More information |
| python-strawc | 0.0.2.1 | More information |
| python-slamdunk | 0.4.3 | More information |
| python-scrublet | 0.2.3 | More information |
| python-screed | 1.1.2 | More information |
| python-scikit-bio | 0.6.0 | More information |
| python-schema-salad | 8.5.20240102191335 | More information |
| python-scanpy | 1.9.6 | More information |
| python-scanorama | 1.7.2 | More information |
| python-pyvcf | 0.6.8-0.476169c | More information |
| python-pyspoa | 0.0.5 | More information |
| python-pysam | 0.20.0 | More information |
| python-pyrodigal | 3.3.0 | More information |
| python-pypairix | 0.3.7 | More information |
| python-pyliftover | 0.4 | More information |
| python-pygenometracks | 3.5 | More information |
| python-pyfit-sne | 1.2.1 | More information |
| python-pyfasta | 0.5.2-1.c2f0611 | More information |
| python-pyfaidx | 0.7.2.1 | More information |
| python-pybigwig | 0.3.22 | More information |
| python-pybbi | 0.3.0 | More information |
| python-pyani | 0.2.12 | More information |
| python-pyahocorasick | 2.1.0 | More information |
| python-py2bit | 0.3.0 | More information |
| python-plastid | 0.6.1 | More information |
| python-ont-fast5-api | 4.0.0 | More information |
| python-mygene | 3.2.2 | More information |
| python-muon | 0.1.6 | More information |
| python-multivelo | 0.1.2 | More information |
| python-mudata | 0.2.3 | More information |
| python-mofax | 0.4.0-0.4d96f8f | More information |
| python-mofapy2 | 0.7.1 | More information |
| python-mgatk | 0.6.7 | More information |
| python-mappy | 2.24 | More information |
| python-loompy | 3.0.7 | More information |
| python-intervaltree | 3.1.0 | More information |
| python-illumina-utils | 2.12 | More information |
| python-ikarus | 0.0.2 | More information |
| python-iced | 0.5.8 | More information |
| python-hicmatrix | 17.1 | More information |
| python-hicexplorer | 3.7.4 | More information |
| python-hic2cool | 0.8.3 | More information |
| python-gseapy | 1.0.4 | More information |
| python-goatools | 1.3.1 | More information |
| python-gffutils | 0.10.1 | More information |
| python-genomic-regions | 0.0.10 | More information |
| python-genomepy | 0.15.0 | More information |
| python-fcsparser | 0.2.8 | More information |
| python-fastalite | 0.3 | More information |
| python-fanc | 0.9.25 | More information |
| python-ete3 | 3.1.3 | More information |
| python-episcanpy | 0.4.0 | More information |
| python-drep | 3.2.0 | More information |
| python-dnaio | 0.10.0 | More information |
| python-dna-features-viewer | 3.1.1 | More information |
| python-dendropy | 4.5.1 | More information |
| python-deeptoolsintervals | 0.1.9 | More information |
| python-deeptools | 3.5.5 | More information |
| python-cwl-utils | 0.32 | More information |
| python-cwl-upgrader | 1.2.11 | More information |
| python-cwlformat | 2022.02.18 | More information |
| python-ctxcore | 0.2.0 | More information |
| python-cooltools | 0.7.0 | More information |
| python-cooler | 0.9.3 | More information |
| python-coolbox | 0.3.8 | More information |
| python-cgatcore | 0.6.15 | More information |
| python-bx-python | 0.9.0 | More information |
| python-bwapy | 0.1.4 | More information |
| python-biothings-client | 0.2.6 | More information |
| python-biopython | 1.80 | More information |
| python-biopython | 1.73 | More information |
| python-bbknn | 1.6.0 | More information |
| python-bamnostic | 1.1.8 | More information |
| python-baltica | 1.1.2 | More information |
| python-arboreto | 0.1.6 | More information |
| pyscenic | 0.11.2-1.5f170fd | More information |
| proteinortho | 6.3.2 | More information |
| prodigal | 2.6.3 | More information |
| prinseq | 0.20.4 | More information |
| preseq | 2.0.3 | More information |
| prank | 170427 | More information |
| porechop | 0.2.3-1.289d5dc | More information |
| plink-ng | 2.00a3.3 | More information |
| plink | 1.07 | More information |
| piranha | 1.2.1-1.0466d36 | More information |
| pigx-scrnaseq | 1.1.9 | More information |
| pigx-sars-cov-2 | 0.0.9 | More information |
| pigx-rnaseq | 0.1.1 | More information |
| pigx-chipseq | 0.1.0 | More information |
| pigx-bsseq | 0.1.8 | More information |
| pigx | 0.0.3 | More information |
| phyml | 3.3.20220408 | More information |
| phylip | 3.697 | More information |
| phast | 1.5 | More information |
| perl-cworld-dekker | 1.01 | More information |
| perl-bio-db-hts | 3.01 | More information |
| pardre | 2.2.5 | More information |
| paml | 4.9e | More information |
| pairadise | 1.0.0 | More information |
| orfm | 0.7.1 | More information |
| ngs-sdk | 2.10.5 | More information |
| ngshmmalign | 0.1.1 | More information |
| ngless | 1.5.0 | More information |
| newick-utils | 1.6-1.da121155 | More information |
| ncbi-vdb | 2.10.6 | More information |
| nanosv | 1.2.4 | More information |
| nanopolish | 0.14.0 | More information |
| music | 0.0.0-1.b1caecd | More information |
| muscle | 3.8.1551 | More information |
| multiqc | 1.14 | More information |
| multichoose | 1.0.3 | More information |
| mudskipper | 0.1.0 | More information |
| mosaik | 2.2.30 | More information |
| mosaicatcher | 0.3.1 | More information |
| morpheus | 2.3.6 | More information |
| minimap2 | 2.28 | More information |
| miniasm | 0.3 | More information |
| minced | 0.3.2 | More information |
| methyldackel | 0.6.1 | More information |
| metal | 2011-03-25 | More information |
| metabat | 2.15 | More information |
| megahit | 1.2.9 | More information |
| megadepth | 1.1.1 | More information |
| mash | 2.1 | More information |
| mantis | 0.1-2.b6979a2 | More information |
| mafft | 7.475 | More information |
| maffilter | 1.3.1 | More information |
| macs | 2.2.9.1 | More information |
| lsgkm | 0.1.1 | More information |
| louvain | 0.2 | More information |
| lofreq | 2.1.5 | More information |
| libsbml | 5.18.0 | More information |
| libmaus2 | 2.0.786 | More information |
| libgff | 2.0.0 | More information |
| libbigwig | 0.4.4 | More information |
| lammps-serial | 0.stable_2Aug2023_update2 | More information |
| lammps | 0.stable_2Aug2023_update2 | More information |
| kraken2 | 2.1.2 | More information |
| khmer | 3.0.0a3 | More information |
| kentutils | 302.0.0 | More information |
| kallisto | 0.50.1 | More information |
| kaiju | 1.9.0 | More information |
| jellyfish | 2.3.0 | More information |
| java-picard | 2.3.0 | More information |
| java-picard | 2.10.3 | More information |
| java-picard | 1.113 | More information |
| java-ngs | 2.10.5 | More information |
| java-maxent | 3.4.4 | More information |
| java-htsjdk | 2.3.0 | More information |
| java-htsjdk | 2.14.3 | More information |
| java-htsjdk | 2.10.1 | More information |
| java-forester | 1.005 | More information |
| java-forester | 0-1.86b07ef | More information |
| java-biojava-phylo | 4.2.11 | More information |
| java-biojava-phylo | 4.0.0 | More information |
| java-biojava-core | 4.2.11 | More information |
| java-biojava-core | 4.0.0 | More information |
| java-biojava-alignment | 4.2.11 | More information |
| java-biojava-alignment | 4.0.0 | More information |
| jamm | 1.0.7.6 | More information |
| ivar | 1.4.2 | More information |
| isolator | 0.0.2-1.24bafc0 | More information |
| intervaltree | 0.0.0-1.b90527f | More information |
| instrain | 1.5.4 | More information |
| infernal | 1.1.4 | More information |
| indelfixer | 1.1 | More information |
| imp | 2.15.0 | More information |
| idr | 2.0.3 | More information |
| htslib | 1.9 | More information |
| htslib | 1.19 | More information |
| htslib | 1.14 | More information |
| htslib | 1.12 | More information |
| htslib | 1.10 | More information |
| htseq | 2.0.2 | More information |
| htscodecs | 1.6.0 | More information |
| homer | 4.11.1 | More information |
| hmmer | 3.3.2 | More information |
| hisat2 | 2.2.1 | More information |
| hisat | 0.1.6 | More information |
| hh-suite | 3.3.0 | More information |
| go-github-com-biogo-store-step | 0.0.0-20201120204734-aad293a2328f | More information |
| go-github-com-biogo-store-llrb | 0.0.0-20201120204734-aad293a2328f | More information |
| go-github-com-biogo-store-kdtree | 0.0.0-20201120204734-aad293a2328f | More information |
| go-github-com-biogo-store-interval | 0.0.0-20201120204734-aad293a2328f | More information |
| go-github-com-biogo-hts-tabix | 1.4.4 | More information |
| go-github-com-biogo-hts-sam | 1.4.4 | More information |
| go-github-com-biogo-hts-fai | 1.4.4 | More information |
| go-github-com-biogo-hts-csi | 1.4.4 | More information |
| go-github-com-biogo-hts-cram | 1.4.4 | More information |
| go-github-com-biogo-hts-bgzf | 1.4.4 | More information |
| go-github-com-biogo-hts-bam | 1.4.4 | More information |
| go-github-com-biogo-graph | 0.0.0-20150317020928-057c1989faed | More information |
| go-github-com-biogo-biogo | 1.0.4 | More information |
| ghc-int-interval-map | 0.0.0.0 | More information |
| gffread | 0.9.12-1.ba7535f | More information |
| gffcompare | 0.10.15-1.be56ef4 | More information |
| genrich | 0.5 | More information |
| gemma | 0.98.3 | More information |
| gdcm | 3.0.20 | More information |
| gdc-client | 1.6.0 | More information |
| fxtract | 2.3 | More information |
| fsom | 0.0.0-1.a6ef318 | More information |
| f-seq | 1.1-1.6ccded3 | More information |
| freebayes | 1.3.7 | More information |
| flexbar | 3.4.0 | More information |
| flash | 1.2.11 | More information |
| flair | 1.6.4 | More information |
| fit-sne | 1.2.1 | More information |
| filtlong | 0.2.0-1.d1bb46d | More information |
| filevercmp | 0-1.1a9b779 | More information |
| fastx-toolkit | 0.0.14 | More information |
| fasttree | 2.1.10 | More information |
| fastqc | 0.11.9 | More information |
| fastp | 0.23.2 | More information |
| fastahack | 1.0.0 | More information |
| fanc | 0-1.354401e | More information |
| express-beta-diversity | 1.0.8 | More information |
| express | 1.5.3 | More information |
| exonerate | 2.4.0 | More information |
| ensembl-vep | 112 | More information |
| emboss | 6.5.7 | More information |
| eigensoft | 7.2.1 | More information |
| edirect-go-programs | 13.3.20200128 | More information |
| edirect | 13.3.20200128 | More information |
| eddylab-squid | 1.9g | More information |
| dropseq-tools | 1.13 | More information |
| discrover | 1.6.0 | More information |
| diamond | 2.1.6 | More information |
| delly | 0.8.3 | More information |
| cwltool | 3.1.20240112164112 | More information |
| cutadapt | 4.0 | More information |
| crossmap | 0.6.1 | More information |
| codingquarry | 2.0 | More information |
| cnvkit | 0.9.10 | More information |
| clustal-omega | 1.2.4 | More information |
| clipper | 2.0.1 | More information |
| ciri-long | 1.0.2 | More information |
| circtools | 1.0.0 | More information |
| checkm | 1.1.3 | More information |
| centrifuge | 1.0.4 | More information |
| cd-hit-auxtools | 4.8.1 | More information |
| cd-hit | 4.8.1 | More information |
| ccwl | 0.3.0 | More information |
| bwa-pssm | 0.5.11 | More information |
| bwa-meth | 0.2.3 | More information |
| bwa | 0.7.18 | More information |
| bppsuite | 2.4.1 | More information |
| bpp-seq-omics | 2.4.1 | More information |
| bpp-seq | 2.4.1 | More information |
| bpp-popgen | 2.4.1 | More information |
| bpp-phyl-omics | 2.4.1 | More information |
| bpp-phyl | 2.4.1 | More information |
| bpp-core | 2.4.1 | More information |
| bowtie1 | 1.3.1 | More information |
| bowtie | 2.3.4.3 | More information |
| bless | 1p02 | More information |
| blast+ | 2.14.0 | More information |
| bits | 2.13.0-1.3cc4567 | More information |
| bismark | 0.24.1 | More information |
| bio-vcf | 0.9.5 | More information |
| biosoup | 0.10.0 | More information |
| bioruby | 2.0.4 | More information |
| bioperl-minimal | 1.7.0 | More information |
| bioparser | 3.0.13 | More information |
| bio-locus | 0.0.7 | More information |
| bio-blastxmlparser | 2.0.4 | More information |
| biobambam2 | 2.0.182 | More information |
| bbmap | 39.01 | More information |
| bandage | 0.8.1 | More information |
| ataqv | 1.0.0 | More information |
| arriba | 1.0.1 | More information |
| adapterremoval | 2.3.3 | More information |