Copy number variant detection from targeted DNA sequencing
CNVkit is a Python library and command-line software toolkit to infer and visualize copy number from high-throughput DNA sequencing data. It is designed for use with hybrid capture, including both whole-exome and custom target panels, and short-read sequencing platforms such as Illumina and Ion Torrent.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/4y63637q8wg7s6jrkk9i67jds3q3jnzg-cnvkit-0.9.5.drv | ||
riscv64-linux | /gnu/store/hsx7szz2y9bcvaywylgbsb0mnf99clhq-cnvkit-0.9.5.drv | ||
powerpc-linux | /gnu/store/6a24809yy7g44kvd7hgxnpr8hii9mdcb-cnvkit-0.9.5.drv | ||
powerpc64le-linux | /gnu/store/qqqgsmhh07kcsgz49q0ixpcvskjs7v2s-cnvkit-0.9.5.drv | ||
mips64el-linux | /gnu/store/42mr7wwzxpk0s4v1j4n24b5czhxmkck0-cnvkit-0.9.5.drv | ||
i686-linux | /gnu/store/3z6bsibf3n3f4nsxp4hqbdj01j3xwsfb-cnvkit-0.9.5.drv | ||
armhf-linux | /gnu/store/6szlgf9nsivihh154cl8nxlb0qrbcgp8-cnvkit-0.9.5.drv | ||
aarch64-linux | /gnu/store/hhiq9k6dr8ib2qy82iclcqdv7cfb2688-cnvkit-0.9.5.drv |
Linter | Message | Location |
---|---|---|
No lint warnings ✓ |