Single-Cell regulatory network inference and clustering
pySCENIC is a Python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/b8cns03kj2893gzg03gf8rh6757131br-pyscenic-0.11.2.drv | ||
| i686-linux | /gnu/store/59dxgv5c5bhwssssxabvsqhcjbm1srg3-pyscenic-0.11.2.drv |
| Linter | Message | Location |
|---|---|---|
| inputs-should-not-be-input Identify inputs that shouldn't be inputs at all | 'python-setuptools' should probably not be an input at all | |
| optional-tests Make sure tests are only run when requested | the 'check' phase should respect #:tests? | |
| profile-collisions Report collisions that would occur due to propagated inputs | propagated inputs python-tornado@5.1.1 and python-tornado@6.1 collide |