Revision 06cd4a84f721ecbd1ee4a9371fe94b0057f36cfa

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Package: trf @ 4.09.1

Synopsis

Tandem Repeats Finder: a program to analyze DNA sequences

Description

A tandem repeat in DNA is two or more adjacent, approximate copies of a pattern of nucleotides. Tandem Repeats Finder is a program to locate and display tandem repeats in DNA sequences. In order to use the program, the user submits a sequence in FASTA format. The output consists of two files: a repeat table file and an alignment file. Submitted sequences may be of arbitrary length. Repeats with pattern size in the range from 1 to 2000 bases are detected.

Home page
https://github.com/Benson-Genomics-Lab/TRF
Location
gnu/packages/bioinformatics.scm (line: 3060, column: 2)
License

Derivations

SystemTargetDerivationBuild status
x86_64-linux/gnu/store/raygvrpci7nggk4pbkk3cyp1gw92cfkl-trf-4.09.1.drv
x86_64-linuxx86_64-w64-mingw32/gnu/store/hq9sbb7x2csz7m17i27wcacvpq4xc1n1-trf-4.09.1.drv
x86_64-linuxriscv64-linux-gnu/gnu/store/wq4668p6gk2yixri77qvnv1l5hy9dj64-trf-4.09.1.drv
x86_64-linuxpowerpc-linux-gnu/gnu/store/b2vma971b9x6l47ylgj86n6202l9sf1i-trf-4.09.1.drv
x86_64-linuxpowerpc64le-linux-gnu/gnu/store/0wywx7p3gssvfhwiw8lx8phv0gv3j0s2-trf-4.09.1.drv
x86_64-linuxmips64el-linux-gnu/gnu/store/j37fjqs5c16hn8sb416qajz3cyppasjx-trf-4.09.1.drv
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riscv64-linux/gnu/store/pgic9kr62lzvjb653dpl4lj5wzdiwfr4-trf-4.09.1.drv
    powerpc-linux/gnu/store/2rwgp0hxh1zyrsz1hzisggqyjic2zazw-trf-4.09.1.drv
      powerpc64le-linux/gnu/store/rg969yzrbxf24i3yszgls1215wd5s724-trf-4.09.1.drv
      mips64el-linux/gnu/store/y51267icpp3lg8sjxqdrdpxfjnbx0h5c-trf-4.09.1.drv
        i686-linux/gnu/store/dq6s9scffai2xif4ws56fml9idjx0m0l-trf-4.09.1.drv
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        armhf-linux/gnu/store/a49ky4fs2npdm8d6hrn2b9nxw3qv6kss-trf-4.09.1.drv
        aarch64-linux/gnu/store/4x10vdcc87ya72fhybi2wxqrxpfbmv0x-trf-4.09.1.drv

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