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Package: trf @ 4.09.1

Synopsis

Tandem Repeats Finder: a program to analyze DNA sequences

Description

A tandem repeat in DNA is two or more adjacent, approximate copies of a pattern of nucleotides. Tandem Repeats Finder is a program to locate and display tandem repeats in DNA sequences. In order to use the program, the user submits a sequence in FASTA format. The output consists of two files: a repeat table file and an alignment file. Submitted sequences may be of arbitrary length. Repeats with pattern size in the range from 1 to 2000 bases are detected.

Home page
https://github.com/Benson-Genomics-Lab/TRF
Location
gnu/packages/bioinformatics.scm (line: 3060, column: 2)
License

Derivations

SystemTargetDerivationBuild status
x86_64-linux/gnu/store/j4gic01ijsha8q8490yjfmyqbx5z4wc0-trf-4.09.1.drv
x86_64-linuxx86_64-w64-mingw32/gnu/store/mr4c64zzp7vpf4n6wbvckz22zx708jkc-trf-4.09.1.drv
x86_64-linuxriscv64-linux-gnu/gnu/store/6f6h9jzzg4hgag4q24cylyca0arxpd9w-trf-4.09.1.drv
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x86_64-linuxpowerpc64le-linux-gnu/gnu/store/2kbnqskhyg6279j2qpmqrd7g21mrr8mh-trf-4.09.1.drv
x86_64-linuxmips64el-linux-gnu/gnu/store/pf75z9vhh71xhppcglrv4wwmc41nkjjv-trf-4.09.1.drv
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        aarch64-linux/gnu/store/d2gwq8a87aac8garr1715kc4q9bck3hb-trf-4.09.1.drv

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