Deconvolution of bulk sequencing experiments using single cell data
BSeq-sc is a bioinformatics analysis pipeline that leverages single-cell sequencing data to estimate cell type proportion and cell type-specific gene expression differences from RNA-seq data from bulk tissue samples. This is a companion package to the publication "A single-cell transcriptomic map of the human and mouse pancreas reveals inter- and intra-cell population structure." Baron et al. Cell Systems (2016) https://www.ncbi.nlm.nih.gov/pubmed/27667365.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/wcdlha0zy0m6dvyb9h923jk6xbawiprf-r-bseqsc-1.0-1.fef3f3e.drv | ||
mips64el-linux | /gnu/store/lrn0i6yybxsjgid6saaypzjqwzm0w1sl-r-bseqsc-1.0-1.fef3f3e.drv | ||
i686-linux | /gnu/store/m0nqwrihhnpw1jnd29cyb9rb141kbr66-r-bseqsc-1.0-1.fef3f3e.drv | ||
armhf-linux | /gnu/store/5xn10zrml1x4jx0w2i0iji0xid4kjzlp-r-bseqsc-1.0-1.fef3f3e.drv | ||
aarch64-linux | /gnu/store/brclpzsz9d4dlrxmpai970mnckblnn2k-r-bseqsc-1.0-1.fef3f3e.drv |
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description Validate package descriptions | sentences in description should be followed by two spaces; possible infraction at 395 |