Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/q2jf9ibpbrzsk3cqylqy9m3islb1f08x-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/m216bmck3581sawxkisjrq1mxhlqw3ya-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/xhlcf8ijj2w55spryjf62r8hmlkcgpgi-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/aw2j03ki5nd5z28whnma08bb3znfs6si-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/xszcjnbdzxcqj193j3kf10639hhq66ip-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/z6wn6jjl8d50hw71j6mrx9kiwfhh18zj-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/7722750x2v2igc98xcgn6zylvjynn0j0-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/s1nl7rp3nld8pg6mp5dka9sfzq8vh87l-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/xffkqxhyh6iqdljn6rqh7z86d25y2fb4-salmon-0.13.1.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 12239 is way too long (99 characters) |