Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/9br668hdm9k8wsv7qhjfmk632xdw893b-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/xfazxyd1m87kxmn0rjzzy16llgs279mp-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/m72q1k5j0i5ns6r486d9y32v5kjnyk13-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/ydhzgnqdy98vfb6m5fg6fbjcldkfcwrm-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/2z37gbrmws2dp2kj95cfmzflfgx951dn-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/2gxbgqwq4m8yydph2icb5bd11g5bvgw4-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/pv3z0qn219c9wg9fyapbzpzjz7y0qg9r-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/m55xjx2qbfbdz5g43jyfn6291y0ngywa-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/hs8hh0fzbwkgmq4jvfngb1a9gdwlxjad-salmon-0.13.1.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 11653 is way too long (99 characters) |