RNA-seq quality control package
RSeQC provides a number of modules that can comprehensively evaluate high throughput sequence data, especially RNA-seq data. Some basic modules inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, etc.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/2vlj5ncry5j6kbs5ww7s2q2q0116w5yf-rseqc-3.0.1.drv | ||
mips64el-linux | /gnu/store/nj4q45ixfg1nbqd4zh7sliiqmq2bnjq2-rseqc-3.0.1.drv | ||
i686-linux | /gnu/store/jmc4gwx7kv8qkrwss6mpgs5yd8nvl3cj-rseqc-3.0.1.drv | ||
armhf-linux | /gnu/store/x0cxsrf8sdqy8v1ngb5kb1dnl30iskgk-rseqc-3.0.1.drv | ||
aarch64-linux | /gnu/store/129xw92kw2p4bpz4zsc4adafak22rykl-rseqc-3.0.1.drv |
Linter | Message | Location |
---|---|---|
inputs-should-be-native Identify inputs that should be native inputs | 'python-cython' should probably be a native input |