Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/6z2jf21r8i7js0hsxgxgznb0cmvm3z5d-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/ghkwa5yzl032i4j74whrrk1rjfd5l942-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/zc3pnsxki4ikrwj8ipcr5c3ybk6qnac9-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/ys8afli2br8x5sav1cgncd2xmnh979dy-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/cp0nh43455h6kw0jd4jqsrbwy60iccv8-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/iwf7bgi6s2rpmx9c31grzfn6y1j665yq-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/09fjr2r57chhj1x7avp10nln0dpz89dc-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/11wgb6xh6q1ycacpcv5m0gy69iqj6y4s-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/hisd8j008n3anjbrn4dzz1rf97926dqr-salmon-0.13.1.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 11792 is way too long (99 characters) |