Count and classify Strand-seq reads
Mosaicatcher counts Strand-seq reads and classifies strand states of each chromosome in each cell using a Hidden Markov Model.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/zpcvq76lp28xqp0j40h5lvd5sq6pgfis-mosaicatcher-0.3.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/gda2724z6c20wfiy4jzfm7a9yl83hh1q-mosaicatcher-0.3.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/p8w9q3nvlnif8zc68dbl2s9036y0zpn8-mosaicatcher-0.3.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/kmyp6gw4f3qqsbgvc2kbaavrh59pimqa-mosaicatcher-0.3.1.drv | |
powerpc64le-linux | /gnu/store/9g0rrljrk1nw71b5sf80kxgcy65wqi26-mosaicatcher-0.3.1.drv | ||
mips64el-linux | /gnu/store/s4380vikwbmd6gcxk1cazn9g607xnsp7-mosaicatcher-0.3.1.drv | ||
i686-linux | /gnu/store/aam2ikv297bv0bllxa238mx4x93qg32n-mosaicatcher-0.3.1.drv | ||
i586-gnu | /gnu/store/p68vv5qgcpkhyqz3d92l4v4k1gmfvw5c-mosaicatcher-0.3.1.drv | ||
armhf-linux | /gnu/store/79jdnanx2flw72mlqnjvi3gdprhj181r-mosaicatcher-0.3.1.drv | ||
aarch64-linux | /gnu/store/3mqwnq6cv41bfc0js3w94z4rdc9xlkc9-mosaicatcher-0.3.1.drv |
Linter | Message | Location |
---|---|---|
patch-headers Validate patch headers | mosaicatcher-unbundle-htslib.patch: patch lacks comment and upstream status |