Mark duplicates in paired-end SAM files
Samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/q93laifsg522mrlid07sjqwvwji9cjvg-samblaster-0.1.24.drv | ||
x86_64-linux | arm-linux-gnueabihf | /gnu/store/q52j4sa19qxdiyg52hzvbbx2vx3pryg1-samblaster-0.1.24.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/hpr7jm7ddvqkhpz2irahywyxm5cply00-samblaster-0.1.24.drv | |
mips64el-linux | /gnu/store/mak99vfa8kz6vcaci0lms49gbm6w3qsl-samblaster-0.1.24.drv | ||
i686-linux | /gnu/store/ysj5k0khpgcfs95ignqp3gan0ygfvz4m-samblaster-0.1.24.drv | ||
armhf-linux | /gnu/store/rjmvpfp85476bws4pq5rfgl0mpdd3g68-samblaster-0.1.24.drv | ||
aarch64-linux | /gnu/store/p3ncb817z0ljzfbbfa1b5rrf58hhqdnm-samblaster-0.1.24.drv |
Linter | Message | Location |
---|---|---|
description Validate package descriptions | sentences in description should be followed by two spaces; possible infraction at 263 |