Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/hwhingqxlsbj8qmd4yimgmi3ppjkv695-salmon-0.13.1.drv | ||
x86_64-linux | arm-linux-gnueabihf | /gnu/store/in2ivjf138yv7avgs302mjk5g2niga8b-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/a8450g9w77ggw6j1p50iq3ycf2haq5v0-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/zmnhpgcrvlazlc545wkwz2a4i3id6f1s-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/28r8iqyr4mrzl7l4f2j78dv86b4d35nq-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/8mhlmmalm53m6mirqwx8lz4qbgrp1f3h-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/k8jvx269p2hhs8lw5c99hnc6bpcip3m2-salmon-0.13.1.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 12142 is way too long (99 characters) |