Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/9jkq6firrqxlpp1iix17fmg3ynvxdmqx-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/sd1z8hs90cpdqh17735z7nk87y9xgzia-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/0ln6zhl4q6l0a6zlbapgg2g0bfr5sn60-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/dhh94sr01il68v4w7vaykvappi1jnr05-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/ci6h533sv944rm60w3l0cz9nahxx2g5w-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/m0bfc7mvj6z78h76kgck4ng2wxdx95yd-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/jkd4jgjmcwhdrb1nidg1pxm61pc2givm-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/d3kdp9066w1l4hj8awh3bx9mg1qw1yva-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/0nh5amd7sad8rd0m6waips2gs1jxvbxy-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 11710 is way too long (99 characters) |