Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/93lb56c8gg5nzs1s7cl79xdbb06qxwg2-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/338z4jjkcxdr0vhjbyxzaxl90aglh2j2-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/2gfipy2srh1y2xk66ws91ac68wqmfiwn-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/l5bgskrl978wpaa4lpn144h2mkib8cbm-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/v5zyg6npyv42f0k98akzrvg3893pmsby-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/8s138z6mkrv0dbaba0zr4bm4kj3bylla-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/cmj40vf32pm65cwaqwrd274qkzb0pyza-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/n4yhl1csbjmh6jqg76fp8z7xwpiy16m5-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/zy5dz6mf22kc7ag9vdvb3zldghlav3jl-salmon-0.13.1.drv |
Linter | Message | Location |
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formatting Look for formatting issues in the source | line 12232 is way too long (99 characters) |