Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/3zi3bvbq169y9pxpgaxhwvrvbamamfci-salmon-0.13.1.drv | ||
x86_64-linux | arm-linux-gnueabihf | /gnu/store/qgrxiyj9njb38mnl4317w7jaxiplj542-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/laqhr88rgpwic8b130ljv36qlvrd3n7m-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/k5izhahzn2wn2gk8pixglkza4f65d6ja-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/7dgam0mfp0b9vib1bs61ldrha6g87adr-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/ww34rg3daz88mxck9rgrwan5mlh4q228-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/jc0kjw8dhf73fxnivc4yv8a891m60k86-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 12035 is way too long (99 characters) |