RNA-seq quality control package
RSeQC provides a number of modules that can comprehensively evaluate high throughput sequence data, especially RNA-seq data. Some basic modules inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, etc.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/9vbgnws5vipjf5cmj4n9fnglrkwqf6r7-rseqc-3.0.1.drv | ||
mips64el-linux | /gnu/store/ir3ca0ldf4fwa1cck426nn02k68f3ars-rseqc-3.0.1.drv | ||
i686-linux | /gnu/store/7x2f5yi40gx6ygsbfv10zrvd5dqjzb43-rseqc-3.0.1.drv | ||
i586-gnu | /gnu/store/kksjrxshvd83vfrx95qkvlipz75lcwn3-rseqc-3.0.1.drv | ||
armhf-linux | /gnu/store/08zyqkcpxhif6y22vkmj5qzzkfjjh9aq-rseqc-3.0.1.drv | ||
aarch64-linux | /gnu/store/yab39bgrcdy0lgiagag7wdvd99wrvg13-rseqc-3.0.1.drv |
Linter | Message | Location |
---|---|---|
inputs-should-be-native Identify inputs that should be native inputs | 'python-cython' should probably be a native input |