Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/f26khc4vmpj6r53hww9dvhxlz0dr5f07-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/chyjfgyhv2ngql6nd2558l468n450hhg-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/cmxdxlb21jp91xsbpkh8666ya10d8fvf-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/f2z8jwxpf2inyyy74plim7y43xakv8rj-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/zrqzasap4lbq52kyvnypvsmr0dfaa5cr-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/6zk39ni1myks8376j17wcfqmccrmlylv-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/4yly7wx668ksn53frry84b2zs2pd50bn-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/vhmzpa829slhc3j6gnz3w5pwg3qwq2iw-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/pi15gvwj5lkhlh962q6gbwbblnkvwny9-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 11772 is way too long (99 characters) |