Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/gv59mzd6f95xnfycqa4rf6pi3ad9nfjh-salmon-0.13.1.drv | ||
x86_64-linux | arm-linux-gnueabihf | /gnu/store/2b9i8djzbrxbarzii5sfvfbg8imy7l0m-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/lp5lkqrvrr6mv0wzi7hcnar2kgyhp5vv-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/9pkmcf54s2kha7a0ld46kp3izhqhcrjm-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/lf3i1k01iaj1iklk9zlj0ngi5ivjkyz6-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/1fl09hdpx3w42zmsp3ly809bpn5n1cxb-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/3jlwlm08h3dyz0yhnh11s812w6c5h04p-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 11940 is way too long (99 characters) |