RNA-seq quality control package
RSeQC provides a number of modules that can comprehensively evaluate high throughput sequence data, especially RNA-seq data. Some basic modules inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, etc.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/hdrp25cnnyp5pjxvwprpr7kv4q7l1h6g-rseqc-2.6.1.drv | ||
mips64el-linux | /gnu/store/s7jcjghws1cds5czgdgray0zxj5jqdb3-rseqc-2.6.1.drv | ||
i686-linux | /gnu/store/qb0f6xadp2g3zrp294rwmbfr1y61d1cs-rseqc-2.6.1.drv | ||
armhf-linux | /gnu/store/vbf0pcncg00h1lxrnlaca320klqvgc4m-rseqc-2.6.1.drv | ||
aarch64-linux | /gnu/store/pr1higfdd8818zns7jvqf5mq8h390w2x-rseqc-2.6.1.drv |
Linter | Message | Location |
---|---|---|
inputs-should-be-native Identify inputs that should be native inputs | 'python2-cython' should probably be a native input |