Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/npa78jw03hkicsd5sr04w2vi9vipmn3a-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/c5pa538d3m3h7xk16pkk1dswrz5miykq-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/fn0x118838x1wd46gkd10m8cp6klrnjw-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/9dkq8mbym7jbl471l5ljn861p6qinqrs-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/y0cwqc1xakx1vr6p3af754fr21s37138-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/xspjylc3cj6mglglbq6406jv3mcjk1wf-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/55djjryqbw3x9j0dx65b8iglcpxg4k03-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/rmx2q72qqd6w1x1n07xl4gmgv0l9cd72-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/nwpi42l9fjh2nqkz9bns8jhag9l8lpj5-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 11949 is way too long (99 characters) |