Predict functional effects of genomic variants
This package provides a Variant Effect Predictor, which predicts the functional effects of genomic variants. It also provides Haplosaurus, which uses phased genotype data to predict whole-transcript haplotype sequences, and Variant Recoder, which translates between different variant encodings.
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/j2m98vmbjrr8rdivsvbmj34xrpcwf4r7-ensembl-vep-103.1.drv | ||
| powerpc64le-linux | /gnu/store/f3y12kylhf7qsr3m5q0hlljcpbwpq5xx-ensembl-vep-103.1.drv | ||
| mips64el-linux | /gnu/store/rw4i1k3pja7jszgyyahfg5sry6mgi7jv-ensembl-vep-103.1.drv | ||
| i686-linux | /gnu/store/1gblx73wxy6jhv8z2l1k5ln0imxafwqn-ensembl-vep-103.1.drv | ||
| i586-gnu | /gnu/store/n4nai801bpdjqwjqd8zv6m7m62rn0363-ensembl-vep-103.1.drv | ||
| armhf-linux | /gnu/store/w6jfngr8d7gr5m0aki6kdprrp1x9rb5j-ensembl-vep-103.1.drv | ||
| aarch64-linux | /gnu/store/3xsf2snnaanyx8wq6g7b7pyfxdj7c29f-ensembl-vep-103.1.drv |
| Linter | Message | Location |
|---|---|---|
| source-file-name Validate file names of sources | the source file name should contain the package name | |
| formatting Look for formatting issues in the source | line 15374 is way too long (92 characters) | |
| formatting Look for formatting issues in the source | line 15422 is way too long (100 characters) |