Revision 59ec9e3f3eb60a53cde5b6b90094927e11e62d8a

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Package: sjcount @ 3.2-1.292d391

Synopsis

Annotation-agnostic splice junction counting pipeline

Description

Sjcount is a utility for fast quantification of splice junctions in RNA-seq data. It is annotation-agnostic and offset-aware. This version does count multisplits.

Home page
https://github.com/pervouchine/sjcount-full/
Location
gnu/packages/bioinformatics.scm (line: 10943, column: 4)
License

Derivations

SystemTargetDerivationBuild status
x86_64-linux/gnu/store/6s5lk06qrr1qcxrh909y49kk6dsqrqdk-sjcount-3.2-1.292d391.drv
    x86_64-linuxx86_64-w64-mingw32/gnu/store/6xbf4d1b7zjhp92f3f64cjxsmxmjsvmr-sjcount-3.2-1.292d391.drv
    x86_64-linuxriscv64-linux-gnu/gnu/store/ivn5lbads3i2b7fvshmzds3g6p9s73xx-sjcount-3.2-1.292d391.drv
    x86_64-linuxpowerpc-linux-gnu/gnu/store/7pvg4fyjziyiqn3irc36g12gc0nqn4k3-sjcount-3.2-1.292d391.drv
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    x86_64-linuxmips64el-linux-gnu/gnu/store/m2jpplvbl1r7r83ka6zik3xryvw8gikw-sjcount-3.2-1.292d391.drv
    x86_64-linuxi686-w64-mingw32/gnu/store/14s169a8153bld7j8s4c6ylvznx7dji3-sjcount-3.2-1.292d391.drv
    x86_64-linuxi586-pc-gnu/gnu/store/zrhgszl4hk44aanbwk6c2c1gwd6sph8g-sjcount-3.2-1.292d391.drv
    x86_64-linuxarm-linux-gnueabihf/gnu/store/pdq2afxzrhkhbwq8nxjmhq80cvhk704b-sjcount-3.2-1.292d391.drv
    x86_64-linuxaarch64-linux-gnu/gnu/store/1w6lky567qnmmnhk8b16nvlizwac7gzf-sjcount-3.2-1.292d391.drv
    riscv64-linux/gnu/store/irdvpfbrgzq2zm3f5f8ml2fd2z8wga4z-sjcount-3.2-1.292d391.drv
      powerpc-linux/gnu/store/5kri32c0jm2143wqzds0srrcgzq9ygql-sjcount-3.2-1.292d391.drv
        powerpc64le-linux/gnu/store/giyy72i20hg9fld001ssm2wlggskl6f9-sjcount-3.2-1.292d391.drv
        mips64el-linux/gnu/store/mzg6526ilpyr0kwh7c5kpzjf16lw6prs-sjcount-3.2-1.292d391.drv
          i686-linux/gnu/store/az8bz40ws10b9b00d96h1bp3l52da27v-sjcount-3.2-1.292d391.drv
          i586-gnu/gnu/store/x8gv0krwsaigqcq5zbp9w4hvqx1janf0-sjcount-3.2-1.292d391.drv
          armhf-linux/gnu/store/1ln5gscqcl7j001vcndc0zfza4yz0wbh-sjcount-3.2-1.292d391.drv
          aarch64-linux/gnu/store/m28yyi8fqvr81c3s6drn37r1v172r8m3-sjcount-3.2-1.292d391.drv

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