RNA-seq quality control package
RSeQC provides a number of modules that can comprehensively evaluate high throughput sequence data, especially RNA-seq data. Some basic modules inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, etc.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/f6z89l89h3qgfzvzz880lcxgdzjinglb-rseqc-3.0.1.drv | ||
mips64el-linux | /gnu/store/6ym1cw5mmwsyqa4860a1v6zmvp9gy9gi-rseqc-3.0.1.drv | ||
i686-linux | /gnu/store/950gvg8n3y2l65zqljm4zpfsca3d1lhx-rseqc-3.0.1.drv | ||
i586-gnu | /gnu/store/40ak04ywilyl85c2awdifk9368f3hq5a-rseqc-3.0.1.drv | ||
armhf-linux | /gnu/store/akxwhqk4wmppgkjp2hnhxfg4gjf2z5rh-rseqc-3.0.1.drv | ||
aarch64-linux | /gnu/store/npf57adrm8wchw4flvxw4yprcz5jifc7-rseqc-3.0.1.drv |
Linter | Message | Location |
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inputs-should-be-native Identify inputs that should be native inputs | 'python-cython' should probably be a native input |