Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/ri1l1nww2aaqnmxwg8plbr4x566jdxzm-salmon-1.4.0.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/qqx0isp21yzxd66bsqvldchx93n6r7cj-salmon-1.4.0.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/i0fmnyp5w4p89ijj5fryf7awpf7fd0dq-salmon-1.4.0.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/526c98gfgd5gjxc6y7bdfh241wiwnkah-salmon-1.4.0.drv | |
powerpc64le-linux | /gnu/store/5c5h61air4bhfyfmchkghwcps4ligq8p-salmon-1.4.0.drv | ||
mips64el-linux | /gnu/store/fhn936snhpvxn7h42dgc27i940bwbckr-salmon-1.4.0.drv | ||
i686-linux | /gnu/store/d4qmd14agjl1055aqcmr3xv5j3jwgsj4-salmon-1.4.0.drv | ||
i586-gnu | /gnu/store/cq3yasbafv5vq8ggbqmqj99id9526lnn-salmon-1.4.0.drv | ||
armhf-linux | /gnu/store/rc628ava99pr6jl3ng9yg4aydw2av2d7-salmon-1.4.0.drv | ||
aarch64-linux | /gnu/store/4iawz9hwszgd8pciyw21rcqff6i3yhm9-salmon-1.4.0.drv |
Linter | Message | Location |
---|---|---|
formatting Look for formatting issues in the source | line 9685 is way too long (92 characters) |