Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/9d0i0n550yfg8nadl0mjj9mmi8srx230-salmon-0.13.1.drv | ||
x86_64-linux | arm-linux-gnueabihf | /gnu/store/p03m5nkla3aviv9j5gw2jr9jyjwzml0b-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/gy8splz7p8lbzc2wz5ymarzpf9sary2q-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/fdvx5bixdigqnyahcbcrkjg5pr9lb2dv-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/k8kr01j654dhsrgnair51mm71sc6jcq2-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/nh7ls4ph33qw7w45h4s60l5d6ay8hscs-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/1z93zig90xp66sh12mflyks5bljnbg8f-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 11911 is way too long (99 characters) |