Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/h3zf2p08hqs8ybvrhh9vb7ny9fzx5z6j-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/yjklj0cid7prdjh6p04bd3anjgs7i6qv-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/pjnyjj73mcvxfsgn4n96h98xhz32il6l-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/96p7sgmx82sjgb6k942il3447w9yk60g-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/di95zwhvm2l4adlmzm0ffs5rncg72ld8-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/5lgnvh6ybz93rbzrac0i2x292gmgzhqk-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/4jhsa0jsjazmh0n7ngpk4ddn5flcxb8p-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/0w0xgpgxrsgfpfk5fjjv6qlksmykh205-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/18p92c4411p3mscqnqnih4iciyj3h6xz-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 11772 is way too long (99 characters) |