SNP-based trajectory inference
Several studies focus on the inference of developmental and response trajectories from single cell RNA-Seq (scRNA-Seq) data. A number of computational methods, often referred to as pseudo-time ordering, have been developed for this task. CRISPR has also been used to reconstruct lineage trees by inserting random mutations. The tbsp package implements an alternative method to detect significant, cell type specific sequence mutations from scRNA-Seq data.
| System | Target | Derivation | Build status |
|---|---|---|---|
| x86_64-linux | /gnu/store/9dk4yr7g46hr254krydcp00wr7sz7jjx-tbsp-1.0.0-1.ec8fff4.drv | ||
| i686-linux | /gnu/store/j8lwnsqlppxqf0r497jvmfa692c5qfgb-tbsp-1.0.0-1.ec8fff4.drv |
| Linter | Message | Location |
|---|---|---|
| source-file-name Validate file names of sources | the source file name should contain the package name |