RNA-seq quality control package
RSeQC provides a number of modules that can comprehensively evaluate high throughput sequence data, especially RNA-seq data. Some basic modules inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, etc.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/qas4y31ln8hv3159ldw8f068igd233ya-rseqc-3.0.1.drv | ||
mips64el-linux | /gnu/store/240gymxahvyaivb8bf9bragzvv2pgyky-rseqc-3.0.1.drv | ||
i686-linux | /gnu/store/5j0dpcpj2s4z2766p8m8p8c5yygm7nfv-rseqc-3.0.1.drv | ||
armhf-linux | /gnu/store/633klfqpr16fc54ss196iy4bi8dbqin7-rseqc-3.0.1.drv | ||
aarch64-linux | /gnu/store/ir0ggz20w008lfalrh4144pddwvxb5hp-rseqc-3.0.1.drv |
Linter | Message | Location |
---|---|---|
inputs-should-be-native Identify inputs that should be native inputs | 'python-cython' should probably be a native input |