RNA-seq quality control package
RSeQC provides a number of modules that can comprehensively evaluate high throughput sequence data, especially RNA-seq data. Some basic modules inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, etc.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/szc6a5fqb5bi8jfnpv8iqh1hnclzd7cx-rseqc-3.0.1.drv | ||
powerpc64le-linux | /gnu/store/haxpi6ir77jm01zlyx0ffv8v7ma5mys5-rseqc-3.0.1.drv | ||
mips64el-linux | /gnu/store/vn676sq7d5hx9zn43mys9bd0mvpwbigw-rseqc-3.0.1.drv | ||
i686-linux | /gnu/store/43gjh4qmv3f8zzm4h5f2zx8yy79ky9gs-rseqc-3.0.1.drv | ||
i586-gnu | /gnu/store/b8fwq8iicilz0sxaf6x0wy9kmz5lg909-rseqc-3.0.1.drv | ||
armhf-linux | /gnu/store/f2v2dxi65p7m97s9fqm7684xb8xcs74w-rseqc-3.0.1.drv | ||
aarch64-linux | /gnu/store/aq2ys1c514g0309rlkcc7w4vanhigs8v-rseqc-3.0.1.drv |
Linter | Message | Location |
---|---|---|
inputs-should-be-native Identify inputs that should be native inputs | 'python-cython' should probably be a native input |