Mark duplicates in paired-end SAM files
Samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/x20kqf5rq1kfyfmjp6gr6s8chv4k72mw-samblaster-0.1.24.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/fklbqkdqpcmca1d68jrkz227p6d8s0si-samblaster-0.1.24.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/criga92n8n3kxjxbr0v9bmviqdnd4yks-samblaster-0.1.24.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/krrfjhwacp79xw3xkh853yq64alkrg6m-samblaster-0.1.24.drv | |
mips64el-linux | /gnu/store/57zc8jnnz41rz1acfgmij0h6mvwi0dlv-samblaster-0.1.24.drv | ||
i686-linux | /gnu/store/gsnxm3c682qv0ph30xq5xxzq1ji2kw7z-samblaster-0.1.24.drv | ||
i586-gnu | /gnu/store/zlidi0p56pv8icdqv1xzb1bhkzbhw1vn-samblaster-0.1.24.drv | ||
armhf-linux | /gnu/store/lgb54npmfzni4fwlg1cihrybj3sxc9ff-samblaster-0.1.24.drv | ||
aarch64-linux | /gnu/store/d56nmkfrwhd1nshnar3gjzdlc6lh1c7c-samblaster-0.1.24.drv |
Linter | Message | Location |
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description Validate package descriptions | sentences in description should be followed by two spaces; possible infraction at 263 |