Quantification from RNA-seq reads using lightweight alignments
Salmon is a program to produce highly-accurate, transcript-level quantification estimates from RNA-seq data. Salmon achieves its accuracy and speed via a number of different innovations, including the use of lightweight alignments (accurate but fast-to-compute proxies for traditional read alignments) and massively-parallel stochastic collapsed variational inference.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/7brmj5p3j1g4vagqqzlc4a69nk2swx0m-salmon-0.13.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/cn0mrzqgvxhwsh43qp523kdvy0zfi3p7-salmon-0.13.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/826zccdpwiq5xs2gzcnadks5kk1qcaxr-salmon-0.13.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/6w4in975zld5sprnfn43h3igw7y7f07c-salmon-0.13.1.drv | |
mips64el-linux | /gnu/store/mmicnbi35xfg1xbwa1ipcd1n9jf9lbm0-salmon-0.13.1.drv | ||
i686-linux | /gnu/store/07r1h08idsnpnb3z4v7zq2niaqbzkvik-salmon-0.13.1.drv | ||
i586-gnu | /gnu/store/xsqg44y548sha5lx6vk74wq3b0xdmkr0-salmon-0.13.1.drv | ||
armhf-linux | /gnu/store/8qhd3wr9pk1fffpndc6g774qdzvxphzz-salmon-0.13.1.drv | ||
aarch64-linux | /gnu/store/7djpwd74cwl7h0czah7k3csk8frv94ys-salmon-0.13.1.drv |
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formatting Look for formatting issues in the source | line 12194 is way too long (99 characters) |