Mark duplicates in paired-end SAM files
Samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/gqg1gy2hv88dsyv4wj680d9d2lihdzvb-samblaster-0.1.24.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/11s95c4h8v84018132lgsrvc91dpaw89-samblaster-0.1.24.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/qhivqrn7f8g6d9p0pn8an29756c0lnbc-samblaster-0.1.24.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/l0pfb2szvmwc2r8ra16anqrhdbsp9n8f-samblaster-0.1.24.drv | |
mips64el-linux | /gnu/store/vxx3lhwxkf6y36im3l8cprlbp5f96wiq-samblaster-0.1.24.drv | ||
i686-linux | /gnu/store/kqabq2swr1wzzlmzacyj9hddnsqp5ixg-samblaster-0.1.24.drv | ||
i586-gnu | /gnu/store/ak0sydzis3rsfazkif30xs39gd1xhxcp-samblaster-0.1.24.drv | ||
armhf-linux | /gnu/store/2vkb4mj7plc7m03hh98a6lxg1cmgnz0j-samblaster-0.1.24.drv | ||
aarch64-linux | /gnu/store/s5rhhl8mwwnwqibggz85pf6g3xqfkjbr-samblaster-0.1.24.drv |
Linter | Message | Location |
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description Validate package descriptions | sentences in description should be followed by two spaces; possible infraction at 263 |