Mark duplicates in paired-end SAM files
Samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/il7g35i0rhcd6dky0d7br40xvhr8f8f2-samblaster-0.1.24.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/f4ss0hzm79v6g2aqdgqdvjd6wd95x8gv-samblaster-0.1.24.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/z9m2fzyj2miar4764zagz9wn5psv385k-samblaster-0.1.24.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/n2i36njxf4b91h3qnp83kn305n2is52f-samblaster-0.1.24.drv | |
mips64el-linux | /gnu/store/r6wlcpxnwdpfw8v8madpks351fy71088-samblaster-0.1.24.drv | ||
i686-linux | /gnu/store/0y7m02nw7jqvpxnwjlfm9jbvy8z929qa-samblaster-0.1.24.drv | ||
i586-gnu | /gnu/store/smi4wv03ygs59qrdipad0bx543r7j5vr-samblaster-0.1.24.drv | ||
armhf-linux | /gnu/store/wjkzz3xwc6nbgz1iv6czahxn8k9yqfrd-samblaster-0.1.24.drv | ||
aarch64-linux | /gnu/store/73skp23zawp0vapqz312psv29925bwll-samblaster-0.1.24.drv |
Linter | Message | Location |
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description Validate package descriptions | sentences in description should be followed by two spaces; possible infraction at 263 |