Count and classify Strand-seq reads
Mosaicatcher counts Strand-seq reads and classifies strand states of each chromosome in each cell using a Hidden Markov Model.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/qa9q1xw6160qggh2wxcap4jbf0hqi7mb-mosaicatcher-0.3.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/acn4840zm653dggjiggi19rppkkcrh65-mosaicatcher-0.3.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/mg0giwfvqvzmhj4vv76mv5xgryy4p6aa-mosaicatcher-0.3.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/110gi9zn6n0rks7ggpvshwygpr3xjfgd-mosaicatcher-0.3.1.drv | |
powerpc64le-linux | /gnu/store/wszf1sd0bspj736isqrgw8shbf3k4wgb-mosaicatcher-0.3.1.drv | ||
mips64el-linux | /gnu/store/jls5dl12l4hwnrnfjmz0ivyf4fmk8bmi-mosaicatcher-0.3.1.drv | ||
i686-linux | /gnu/store/l01zjk4mx6a6hcq79n32r7idgvlvlrbf-mosaicatcher-0.3.1.drv | ||
i586-gnu | /gnu/store/fy14bpdrjh5knahwqzwkqjql7qwfll00-mosaicatcher-0.3.1.drv | ||
armhf-linux | /gnu/store/k6amjh4siaf6ijz1hlma26bjlf2k91b4-mosaicatcher-0.3.1.drv | ||
aarch64-linux | /gnu/store/18q9fgspvxl1f3csjfapxzz9fimird0n-mosaicatcher-0.3.1.drv |
Linter | Message | Location |
---|---|---|
patch-headers Validate patch headers | mosaicatcher-unbundle-htslib.patch: patch lacks comment and upstream status |