Signal-level analysis of Oxford Nanopore sequencing data
This package analyses the Oxford Nanopore sequencing data at signal-level. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs (Single nucleotide polymorphisms) and indels with respect to a reference genome and more.
| Linter | Message | Location |
|---|---|---|
| input-labels Identify input labels that do not match package names | label 'bioperl' does not match package name 'bioperl-minimal' | |
| input-labels Identify input labels that do not match package names | label 'python' does not match package name 'python-wrapper' | |
| wrapper-inputs Make sure 'wrap-program' can finds its interpreter. | "bash-minimal" should be in 'inputs' when 'wrap-program' is used | |
| formatting Look for formatting issues in the source | line 14417 is way too long (95 characters) |