Count and classify Strand-seq reads
Mosaicatcher counts Strand-seq reads and classifies strand states of each chromosome in each cell using a Hidden Markov Model.
System | Target | Derivation | Build status |
---|---|---|---|
x86_64-linux | /gnu/store/f8f297bvngfpkrh2aiydnqshncijw5x1-mosaicatcher-0.3.1.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/94izvf9fra83kjpy9j0llwqqghh4ral8-mosaicatcher-0.3.1.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/qpz2q4yapmzhyq0l8l0q6kxh6zb61hdr-mosaicatcher-0.3.1.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/j93278yfa3idyxxr1ncd7fi1zwpdrm7v-mosaicatcher-0.3.1.drv | |
powerpc64le-linux | /gnu/store/psl9k63ha3ylmphrhckfbli9dgz0gdr3-mosaicatcher-0.3.1.drv | ||
mips64el-linux | /gnu/store/9bmqnwj1ncq4g0dssjwc18agr2p7rirl-mosaicatcher-0.3.1.drv | ||
i686-linux | /gnu/store/irjip97x4rdd4ffm94miaqa1v767yj1i-mosaicatcher-0.3.1.drv | ||
i586-gnu | /gnu/store/aih17y6k4xnb9kvbiriyw1lfp95x11iq-mosaicatcher-0.3.1.drv | ||
armhf-linux | /gnu/store/g508yn9nbrwlkjfcbkhlybdfbjdaw1fd-mosaicatcher-0.3.1.drv | ||
aarch64-linux | /gnu/store/cq8y8cgq6ij5gwqdblmdvbn541q6z7d9-mosaicatcher-0.3.1.drv |
Linter | Message | Location |
---|---|---|
patch-headers Validate patch headers | mosaicatcher-unbundle-htslib.patch: patch lacks comment and upstream status |