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Package: rsem @ 1.3.1

Synopsis

Estimate gene expression levels from RNA-Seq data

Description

RSEM is a software package for estimating gene and isoform expression levels from RNA-Seq data. The RSEM package provides a user-friendly interface, supports threads for parallel computation of the EM algorithm, single-end and paired-end read data, quality scores, variable-length reads and RSPD estimation. In addition, it provides posterior mean and 95% credibility interval estimates for expression levels. For visualization, it can generate BAM and Wiggle files in both transcript-coordinate and genomic-coordinate.

Home page
http://deweylab.biostat.wisc.edu/rsem/
Location
gnu/packages/bioinformatics.scm (line: 5860, column: 2)
License

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