Mark duplicates in paired-end SAM files
Samblaster is a fast and flexible program for marking duplicates in read-id grouped paired-end SAM files. It can also optionally output discordant read pairs and/or split read mappings to separate SAM files, and/or unmapped/clipped reads to a separate FASTQ file. When marking duplicates, samblaster will require approximately 20MB of memory per 1M read pairs.
System | Target | Derivation | Build status |
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x86_64-linux | /gnu/store/6xcybqys2ihdmh615rxaxsagknf3pdqa-samblaster-0.1.24.drv | ||
x86_64-linux | i586-pc-gnu | /gnu/store/6lq12fjzhkrb84gsb04553i9jvf4k8ff-samblaster-0.1.24.drv | |
x86_64-linux | arm-linux-gnueabihf | /gnu/store/ik81jsr39bkpjmvg4xgc6510fr3qniiv-samblaster-0.1.24.drv | |
x86_64-linux | aarch64-linux-gnu | /gnu/store/qxjbg4fbbm5ddfia77cw7f737ih8fhw8-samblaster-0.1.24.drv | |
mips64el-linux | /gnu/store/mzpk86mn3x3snrjxxkkrwja3l889wh4h-samblaster-0.1.24.drv | ||
i686-linux | /gnu/store/0iw1p2c8nncvpkkssibbfhykqqqyi5kw-samblaster-0.1.24.drv | ||
i586-gnu | /gnu/store/z0rd4v36pa96y1y8qi081i5kr8ifnxr5-samblaster-0.1.24.drv | ||
armhf-linux | /gnu/store/kp4i520wxfyvy3bc5q7y24fgxk791nbq-samblaster-0.1.24.drv | ||
aarch64-linux | /gnu/store/lrl3drxfqncqb5a0vrcy9dis2aj00jbj-samblaster-0.1.24.drv |
Linter | Message | Location |
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description Validate package descriptions | sentences in description should be followed by two spaces; possible infraction at 263 |